myRT

myRT report for GCA_009907125.1_ASM990712v1

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Seq: JAAASX010000012.1 Klebsiella pneumoniae strain 852K 852k_contig12, whole genome shotgun sequence (1227 bp)
Overview 1 RT 1: 3-1226 bp Neighborhood of RT #1 [3, 1226] RVT-GII Feature: gene Location: 3-881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408-867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 408-867 bp Feature: gene Location: 1035-1226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAASX010000138.1 Klebsiella pneumoniae strain 852K 852k_contig138, whole genome shotgun sequence (132983 bp)
Overview 1 RT 1: 32166-39019 bp Neighborhood of RT #1 [32166, 39036] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32166-32831 bp Feature: domain Description: INT_P4_C Location: 32271-32829 bp Feature: domain Description: INT_P4_C Location: 32 2 71-32 82 9 bp Feature: gene Location: 33092-33532 bp Feature: domain Description: Integrase_1 Location: 33098-33314 bp Feature: domain Description: Integrase_1 Location: 33098-33314 bp Feature: gene Location: 33589-35667 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33997-34441 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33997-34441 bp Feature: gene Location: 35667-38276 bp Feature: domain Description: FimD Location: 35724-38265 bp Feature: domain Description: FimD Location: 3572 4-382 65 bp Feature: gene Location: 38308-39036 bp Feature: domain Description: FimC Location: 38356-39019 bp Feature: domain Description: FimC Location: 38356-39019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JAAASX010000141.1 Klebsiella pneumoniae strain 852K 852k_contig141, whole genome shotgun sequence (9298 bp)
Overview 1 RT 1: 7501-8903 bp Neighborhood of RT #1 [7501, 9295] RVT-GII Feature: gene Location: 7501-7716 bp Feature: gene Location: 7983-8561 bp Feature: gene Location: 8447-9295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8450-8903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8450-8903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAASX010000203.1 Klebsiella pneumoniae strain 852K 852k_contig203, whole genome shotgun sequence (1212 bp)
Overview 1 RT 1: 98-1139 bp Neighborhood of RT #1 [98, 1144] RVT-GII GIIM Feature: gene Location: 98-1144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290-914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290-914 bp Feature: domain Description: GIIM Note: maturase Location: 953-1139 bp Feature: domain Description: GIIM Note: maturase Location: 953-1139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAASX010000027.1 Klebsiella pneumoniae strain 852K 852k_contig27, whole genome shotgun sequence (751 bp)
Overview 1 RT 1: 59-356 bp Neighborhood of RT #1 [59, 748] RVT-GII Feature: gene Location: 59-748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62-356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62-35 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAASX010000047.1 Klebsiella pneumoniae strain 852K 852k_contig47, whole genome shotgun sequence (1137 bp)
Overview 1 RT 1: 3-1054 bp Neighborhood of RT #1 [3, 1054] RVT-GII Feature: gene Location: 3-767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-76 5 bp Feature: gene Location: 821-1054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII