myRT

myRT report for GCA_009907205.1_ASM990720v1

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Seq: JAAASW010000149.1 Klebsiella pneumoniae strain 852 852_contig149, whole genome shotgun sequence (1137 bp)
Overview 1 RT 1: 3-1054 bp Neighborhood of RT #1 [3, 1054] RVT-GII Feature: gene Location: 3-767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-765 bp Feature: gene Location: 821-1054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAASW010000017.1 Klebsiella pneumoniae strain 852 852_contig17, whole genome shotgun sequence (1237 bp)
Overview 1 RT 1: 1-1236 bp Neighborhood of RT #1 [1, 1236] RVT-GII Feature: gene Location: 1-888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-886 bp Feature: gene Location: 1045-1236 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAASW010000237.1 Klebsiella pneumoniae strain 852 852_contig237, whole genome shotgun sequence (217 bp)
Overview 1 RT 1: 2-209 bp Neighborhood of RT #1 [2, 214] RVT-GII Feature: gene Location: 2-214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAASW010000251.1 Klebsiella pneumoniae strain 852 852_contig251, whole genome shotgun sequence (4495 bp)
Overview 1 RT 1: 2050-4412 bp Neighborhood of RT #1 [2050, 4417] DDE_Tnp_1_5 RVT-GII GIIM Feature: gene Location: 2050-2196 bp Feature: gene Location: 2335-3303 bp Feature: domain Description: DDE_Tnp_1_5 Location: 2437-2770 bp Feature: domain Description: DDE_Tnp_1_5 Location: 24 37-2770 bp Feature: gene Location: 3371-4417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3563-4187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3563-4 187 bp Feature: domain Description: GIIM Note: maturase Location: 4226-4412 bp Feature: domain Description: GIIM Note: maturase Location: 4 226-4 4 12 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_5 (pfam13737), RVT-GII, GIIM (pfam08388)

Seq: JAAASW010000288.1 Klebsiella pneumoniae strain 852 852_contig288, whole genome shotgun sequence (90036 bp)
Overview 1 RT 1: 32176-39029 bp Neighborhood of RT #1 [32176, 39046] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32176-32841 bp Feature: domain Description: INT_P4_C Location: 32281-32839 bp Feature: domain Description: INT_P4_C Location: 32281-32839 bp Feature: gene Location: 33102-33542 bp Feature: domain Description: Integrase_1 Location: 33108-33324 bp Feature: domain Description: Integrase_1 Location: 33108-33324 bp Feature: gene Location: 33599-35677 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34007-34451 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34007-3445 1 bp Feature: gene Location: 35677-38286 bp Feature: domain Description: FimD Location: 35734-38275 bp Feature: domain Description: FimD Location: 35 734-38275 bp Feature: gene Location: 38318-39046 bp Feature: domain Description: FimC Location: 38366-39029 bp Feature: domain Description: FimC Location: 38366-39029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JAAASW010000048.1 Klebsiella pneumoniae strain 852 852_contig48, whole genome shotgun sequence (751 bp)
Overview 1 RT 1: 1-301 bp Neighborhood of RT #1 [1, 693] RVT-GII Feature: gene Location: 1-693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAASW010000082.1 Klebsiella pneumoniae strain 852 852_contig82, whole genome shotgun sequence (6798 bp)
Overview 1 RT 1: 2-1708 bp Neighborhood of RT #1 [2, 1708] RVT-GII Feature: gene Location: 2-862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-47 0 bp Feature: gene Location: 748-1326 bp Feature: gene Location: 1385-1708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII