myRT

myRT report for GCA_009907285.1_ASM990728v1

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Seq: JAAAST010000134.1 Klebsiella pneumoniae strain 2822 2822_contig134, whole genome shotgun sequence (1914 bp)
Overview 1 RT 1: 2-1463 bp Neighborhood of RT #1 [2, 1855] RVT-GII Feature: gene Location: 2-214 bp Feature: gene Location: 368-1855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1 463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAAST010000026.1 Klebsiella pneumoniae strain 2822 2822_contig26, whole genome shotgun sequence (116492 bp)
Overview 1 RT 1: 18111-24964 bp Neighborhood of RT #1 [18111, 24981] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 18111-18776 bp Feature: domain Description: INT_P4_C Location: 18216-18774 bp Feature: domain Description: INT_P4_C Location: 182 16-18774 bp Feature: gene Location: 19037-19477 bp Feature: domain Description: Integrase_1 Location: 19043-19259 bp Feature: domain Description: Integrase_1 Location: 19043-192 59 bp Feature: gene Location: 19534-21612 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 19942-20386 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 19942 -2 0386 bp Feature: gene Location: 21612-24221 bp Feature: domain Description: FimD Location: 21669-24210 bp Feature: domain Description: FimD Location: 2 1669-2 42 10 bp Feature: gene Location: 24253-24981 bp Feature: domain Description: FimC Location: 24301-24964 bp Feature: domain Description: FimC Location: 2 4301-2 4964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)