myRT

myRT report for GCA_009907335.1_ASM990733v1

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Seq: JAAASS010000015.1 Klebsiella pneumoniae strain 157 157_contig15, whole genome shotgun sequence (272198 bp)
Overview 1 RT 1: 725-7578 bp Neighborhood of RT #1 [725, 7595] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 725-1390 bp Feature: domain Description: INT_P4_C Location: 830-1388 bp Feature: domain Description: INT_P4_C Location: 830-1 388 bp Feature: gene Location: 1651-2091 bp Feature: domain Description: Integrase_1 Location: 1657-1873 bp Feature: domain Description: Integrase_1 Location: 1 657-1 873 bp Feature: gene Location: 2148-4226 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2556-3000 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2556-3000 bp Feature: gene Location: 4226-6835 bp Feature: domain Description: FimD Location: 4283-6824 bp Feature: domain Description: FimD Location: 4283-6824 bp Feature: gene Location: 6867-7595 bp Feature: domain Description: FimC Location: 6915-7578 bp Feature: domain Description: FimC Location: 691 5-7578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JAAASS010000056.1 Klebsiella pneumoniae strain 157 157_contig56, whole genome shotgun sequence (34751 bp)
Overview 1 RT 1: 7511-10781 bp Neighborhood of RT #1 [7511, 10795] RVT-GII PRK10276 Feature: gene Location: 7511-7726 bp Feature: gene Location: 7993-8223 bp Feature: gene Location: 8457-9968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8862-9576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8862 -9576 bp Feature: gene Location: 10019-10252 bp Feature: gene Location: 10370-10795 bp Feature: domain Description: PRK10276 Location: 10373-10781 bp Feature: domain Description: PRK102 76 Location: 10373-10781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)