myRT

myRT report for GCA_009907605.1_ASM990760v1

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Seq: JAAATA010000165.1 Klebsiella pneumoniae strain C2 C2_contig165, whole genome shotgun sequence (27743 bp)
Overview 1 RT 1: 22946-26283 bp Neighborhood of RT #1 [22946, 26348] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 22946-23185 bp Feature: gene Location: 23248-23703 bp Feature: domain Description: PHA02517 Location: 23257-23677 bp Feature: domain Description: PHA0251 7 Location: 23257-23677 bp Feature: gene Location: 23799-25322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24072-24804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24072-24804 bp Feature: domain Description: GIIM Note: maturase Location: 24879-25077 bp Feature: domain Description: GIIM Note: maturase Location: 24879-25077 bp Feature: gene Location: 25276-25701 bp Feature: gene Location: 25914-26348 bp Feature: domain Description: PHA02517 Location: 26016-26283 bp Feature: domain Description: PHA0251 7 Location: 2601 6-26283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JAAATA010000196.1 Klebsiella pneumoniae strain C2 C2_contig196, whole genome shotgun sequence (126148 bp)
Overview 1 RT 1: 87109-93977 bp Neighborhood of RT #1 [87109, 93979] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 87109-87837 bp Feature: domain Description: FimC Location: 87157-87820 bp Feature: domain Description: FimC Location: 87157-8782 0 bp Feature: gene Location: 87869-90478 bp Feature: domain Description: FimD Location: 87926-90467 bp Feature: domain Description: FimD Location: 8792 6-90467 bp Feature: gene Location: 90478-92556 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 90886-91330 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 90886-91330 bp Feature: gene Location: 92613-93053 bp Feature: domain Description: Integrase_1 Location: 92619-92835 bp Feature: domain Description: Integrase_1 Location: 92 619-92 835 bp Feature: gene Location: 93314-93979 bp Feature: domain Description: INT_P4_C Location: 93419-93977 bp Feature: domain Description: INT_P4_C Location: 93419-93977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: JAAATA010000060.1 Klebsiella pneumoniae strain C2 C2_contig60, whole genome shotgun sequence (1809 bp)
Overview 1 RT 1: 61-1808 bp Neighborhood of RT #1 [61, 1808] RVT-GII Feature: gene Location: 61-1398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 316-1006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 16-1006 bp Feature: gene Location: 1545-1808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAATA010000081.1 Klebsiella pneumoniae strain C2 C2_contig81, whole genome shotgun sequence (2584 bp)
Overview 1 RT 1: 2-2186 bp Neighborhood of RT #1 [2, 2383] RVT-GII PRK10276 Feature: gene Location: 2-265 bp Feature: gene Location: 340-1749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 667-1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 667-1357 bp Feature: gene Location: 1827-2066 bp Feature: gene Location: 2066-2383 bp Feature: domain Description: PRK10276 Location: 2072-2186 bp Feature: domain Description: PRK10276 Location: 2072-2186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)