myRT

myRT report for GCA_009907625.1_ASM990762v1

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Seq: JAAASR010000205.1 Klebsiella pneumoniae strain D30-04 40-D30-04_contig205, whole genome shotgun sequence (1914 bp)
Overview 1 RT 1: 2-1463 bp Neighborhood of RT #1 [2, 1855] RVT-GII Feature: gene Location: 2-214 bp Feature: gene Location: 368-1855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1 463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAASR010000318.1 Klebsiella pneumoniae strain D30-04 40-D30-04_contig318, whole genome shotgun sequence (1853 bp)
Overview 1 RT 1: 3-1497 bp Neighborhood of RT #1 [3, 1499] RVT-UG3 INT_P4_C PRK09692 Feature: gene Location: 3-746 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 291-723 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 91-72 3 bp Feature: gene Location: 786-1211 bp Feature: domain Description: INT_P4_C Location: 789-1209 bp Feature: domain Description: INT_P4_C Location: 789-12 09 bp Feature: gene Location: 1284-1499 bp Feature: domain Description: PRK09692 Location: 1293-1497 bp Feature: domain Description: PRK09692 Location: 12 93-1497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, INT_P4_C (cd00801), PRK09692 (Integrase; provisional)

Seq: JAAASR010000032.1 Klebsiella pneumoniae strain D30-04 40-D30-04_contig32, whole genome shotgun sequence (121937 bp)
Overview 1 RT 1: 83270-90138 bp Neighborhood of RT #1 [83270, 90140] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 83270-83998 bp Feature: domain Description: FimC Location: 83303-83981 bp Feature: domain Description: FimC Location: 83 3 03 -83 981 bp Feature: gene Location: 84030-86639 bp Feature: domain Description: FimD Location: 84087-86628 bp Feature: domain Description: FimD Location: 84087-86628 bp Feature: gene Location: 86639-88717 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 87047-87491 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 87047-87491 bp Feature: gene Location: 88774-89214 bp Feature: domain Description: Integrase_1 Location: 88780-88996 bp Feature: domain Description: Integrase_1 Location: 88780-88996 bp Feature: gene Location: 89475-90140 bp Feature: domain Description: INT_P4_C Location: 89580-90138 bp Feature: domain Description: INT_P4_C Location: 89580-9013 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)