myRT

myRT report for GCA_009907715.1_ASM990771v1

Download annotations/find similar RTs

Seq: JAAASO010000130.1 Klebsiella pneumoniae strain 263 263_contig130, whole genome shotgun sequence (1658 bp)
Overview 1 RT 1: 2-1496 bp Neighborhood of RT #1 [2, 1657] RVT-Retrons Feature: gene Location: 2-667 bp Feature: gene Location: 782-1657 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 962-1496 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 962-1 496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JAAASO010000025.1 Klebsiella pneumoniae strain 263 263_contig25, whole genome shotgun sequence (51827 bp)
Overview 1 RT 1: 43563-46747 bp Neighborhood of RT #1 [43563, 46747] PRK10276 RVT-GII Feature: gene Location: 43563-43988 bp Feature: domain Description: PRK10276 Location: 43566-43974 bp Feature: domain Description: PRK102 76 Location: 43566-43974 bp Feature: gene Location: 44106-44339 bp Feature: gene Location: 44390-45901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44795-45509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44795-45509 bp Feature: gene Location: 46135-46365 bp Feature: gene Location: 46424-46747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: JAAASO010000034.1 Klebsiella pneumoniae strain 263 263_contig34, whole genome shotgun sequence (107184 bp)
Overview 1 RT 1: 715-7568 bp Neighborhood of RT #1 [715, 7585] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 715-1380 bp Feature: domain Description: INT_P4_C Location: 820-1378 bp Feature: domain Description: INT_P4_C Location: 820-13 78 bp Feature: gene Location: 1641-2081 bp Feature: domain Description: Integrase_1 Location: 1647-1863 bp Feature: domain Description: Integrase_1 Location: 1647-1863 bp Feature: gene Location: 2138-4216 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2546-2990 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2546-2990 bp Feature: gene Location: 4216-6825 bp Feature: domain Description: FimD Location: 4273-6814 bp Feature: domain Description: FimD Location: 4273 -6814 bp Feature: gene Location: 6857-7585 bp Feature: domain Description: FimC Location: 6905-7568 bp Feature: domain Description: FimC Location: 6905-7568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)