myRT

myRT report for GCA_009907875.1_ASM990787v1

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Seq: JAAASG010000146.1 Escherichia coli strain C02 Ec-C-01-1_contig146, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAASG010000174.1 Escherichia coli strain C02 Ec-C-01-1_contig174, whole genome shotgun sequence (54491 bp)
Overview 1 RT 1: 27381-35082 bp Neighborhood of RT #1 [27381, 35219] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 27381-28634 bp Feature: domain Description: proA Location: 27408-28599 bp Feature: domain Description: proA Location: 2 7408-2 8599 bp Feature: gene Location: 29188-29658 bp Feature: gene Location: 30005-33214 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30533-31022 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30533-3102 2 bp Feature: domain Description: nitrilase Location: 32528-33125 bp Feature: domain Description: nitrilase Location: 32 52 8-3312 5 bp Feature: gene Location: 33509-34312 bp Feature: domain Description: AbiEi_3_N Location: 33542-33803 bp Feature: domain Description: AbiEi_3_N Location: 33542 -33803 bp Feature: domain Description: AbiEi_3 Location: 33815-34271 bp Feature: domain Description: AbiEi_3 Location: 33815-342 71 bp Feature: gene Location: 34299-35219 bp Feature: domain Description: AbiEii Location: 34341-35082 bp Feature: domain Description: AbiEii Location: 34341-35082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JAAASG010000002.1 Escherichia coli strain C02 Ec-C-01-1_contig2, whole genome shotgun sequence (22101 bp)
Overview 1 RT 1: 18053-22098 bp Neighborhood of RT #1 [18053, 22098] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 18053-19315 bp Feature: domain Description: YesM Location: 18566-19307 bp Feature: domain Description: YesM Location: 18566-193 07 bp Feature: gene Location: 19345-19515 bp Feature: gene Location: 19865-20386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19871-20153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19871-20153 bp Feature: domain Description: GIIM Note: maturase Location: 20201-20381 bp Feature: domain Description: GIIM Note: maturase Location: 20201-203 81 bp Feature: gene Location: 20414-20953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20744-20822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20744-20822 bp Feature: gene Location: 20984-21181 bp Feature: gene Location: 21439-22098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)