myRT

myRT report for GCA_009907885.1_ASM990788v1

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Seq: JAAASF010000101.1 Escherichia coli strain A01 Ec-A01_contig101, whole genome shotgun sequence (2273 bp)
Overview 1 RT 1: 93-2270 bp Neighborhood of RT #1 [93, 2270] RVT-GII GIIM YkfC Feature: gene Location: 93-1301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-783 bp Feature: domain Description: GIIM Note: maturase Location: 858-1056 bp Feature: domain Description: GIIM Note: maturase Location: 858-1 056 bp Feature: gene Location: 1339-1617 bp Feature: domain Description: YkfC Location: 1348-1612 bp Feature: domain Description: YkfC Location: 1 348-1 61 2 bp Feature: gene Location: 1911-2270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YkfC (COG3344)

Seq: JAAASF010000163.1 Escherichia coli strain A01 Ec-A01_contig163, whole genome shotgun sequence (26095 bp)
Overview 1 RT 1: 6368-10659 bp Neighborhood of RT #1 [6368, 10659] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 6368-7630 bp Feature: domain Description: YesM Location: 6881-7622 bp Feature: domain Description: YesM Location: 6881-762 2 bp Feature: gene Location: 7660-7830 bp Feature: gene Location: 8180-8701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8186-8468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8186-8468 bp Feature: domain Description: GIIM Note: maturase Location: 8516-8696 bp Feature: domain Description: GIIM Note: maturase Location: 8516-8696 bp Feature: gene Location: 8729-9268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9059-9137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9059-9137 bp Feature: gene Location: 9299-9496 bp Feature: gene Location: 9754-10659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JAAASF010000018.1 Escherichia coli strain A01 Ec-A01_contig18, whole genome shotgun sequence (47827 bp)
Overview 1 RT 1: 20787-28488 bp Neighborhood of RT #1 [20787, 28625] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 20787-22040 bp Feature: domain Description: proA Location: 20814-22005 bp Feature: domain Description: proA Location: 20814-22005 bp Feature: gene Location: 22594-23064 bp Feature: gene Location: 23411-26620 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23939-24428 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23 93 9-24428 bp Feature: domain Description: nitrilase Location: 25934-26531 bp Feature: domain Description: nitrilase Location: 2593 4-2653 1 bp Feature: gene Location: 26915-27718 bp Feature: domain Description: AbiEi_3_N Location: 26948-27209 bp Feature: domain Description: AbiEi_3 _N Location: 26948-27209 bp Feature: domain Description: AbiEi_3 Location: 27221-27677 bp Feature: domain Description: AbiEi_3 Location: 27221-27677 bp Feature: gene Location: 27705-28625 bp Feature: domain Description: AbiEii Location: 27747-28488 bp Feature: domain Description: AbiEii Location: 27747-28488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)