myRT

myRT report for GCA_009907915.1_ASM990791v1

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Seq: JAAASE010000154.1 Escherichia coli strain 3471 Ec-3471_contig154, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAASE010000003.1 Escherichia coli strain 3471 Ec-3471_contig3, whole genome shotgun sequence (55007 bp)
Overview 1 RT 1: 25949-33650 bp Neighborhood of RT #1 [25949, 33787] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 25949-27202 bp Feature: domain Description: proA Location: 25976-27167 bp Feature: domain Description: proA Location: 2 5976-2 7167 bp Feature: gene Location: 27756-28226 bp Feature: gene Location: 28573-31782 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 29101-29590 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 9101-2 9590 bp Feature: domain Description: nitrilase Location: 31096-31693 bp Feature: domain Description: nitrilase Location: 31096-31693 bp Feature: gene Location: 32077-32880 bp Feature: domain Description: AbiEi_3_N Location: 32110-32371 bp Feature: domain Description: AbiEi_3_N Location: 32 110-32 371 bp Feature: domain Description: AbiEi_3 Location: 32383-32839 bp Feature: domain Description: AbiEi_3 Location: 32 383-32 839 bp Feature: gene Location: 32867-33787 bp Feature: domain Description: AbiEii Location: 32909-33650 bp Feature: domain Description: AbiEii Location: 32 909-33650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JAAASE010000009.1 Escherichia coli strain 3471 Ec-3471_contig9, whole genome shotgun sequence (48383 bp)
Overview 1 RT 1: 18143-22434 bp Neighborhood of RT #1 [18143, 22434] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 18143-19405 bp Feature: domain Description: YesM Location: 18656-19397 bp Feature: domain Description: YesM Location: 18656-193 97 bp Feature: gene Location: 19435-19605 bp Feature: gene Location: 19955-20476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19961-20243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19961-20243 bp Feature: domain Description: GIIM Note: maturase Location: 20291-20471 bp Feature: domain Description: GIIM Note: maturase Location: 20291-20471 bp Feature: gene Location: 20504-21043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20834-20912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2083 4-20912 bp Feature: gene Location: 21074-21271 bp Feature: gene Location: 21529-22434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)