myRT

myRT report for GCA_009907925.1_ASM990792v1

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Seq: JAAASC010000043.1 Escherichia coli strain 570 Ec-570_contig43, whole genome shotgun sequence (25314 bp)
Overview 1 RT 1: 5587-9878 bp Neighborhood of RT #1 [5587, 9878] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 5587-6849 bp Feature: domain Description: YesM Location: 6100-6841 bp Feature: domain Description: YesM Location: 61 00-6841 bp Feature: gene Location: 6879-7049 bp Feature: gene Location: 7399-7920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7405-7687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7405-7687 bp Feature: domain Description: GIIM Note: maturase Location: 7735-7915 bp Feature: domain Description: GIIM Note: maturase Location: 7735-791 5 bp Feature: gene Location: 7948-8487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8278-8356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8278-8356 bp Feature: gene Location: 8518-8715 bp Feature: gene Location: 8973-9878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JAAASC010000087.1 Escherichia coli strain 570 Ec-570_contig87, whole genome shotgun sequence (145975 bp)
Overview 1 RT 1: 117725-123756 bp Neighborhood of RT #1 [117725, 123756] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 117725-118645 bp Feature: domain Description: AbiEii Location: 117767-118508 bp Feature: domain Description: AbiEii Location: 117767-118508 bp Feature: gene Location: 118632-119435 bp Feature: domain Description: AbiEi_3_N Location: 118665-118926 bp Feature: domain Description: AbiEi_3_N Location: 118665-11892 6 bp Feature: domain Description: AbiEi_3 Location: 118938-119394 bp Feature: domain Description: AbiEi_3 Location: 118938-119394 bp Feature: gene Location: 119730-122939 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 120258-120747 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 12 02 58-12 0747 bp Feature: domain Description: nitrilase Location: 122253-122850 bp Feature: domain Description: nitrilase Location: 12 2 2 53-12 2 850 bp Feature: gene Location: 123100-123240 bp Feature: domain Description: Phage_ASH Location: 123127-123220 bp Feature: domain Description: Phage_ASH Location: 12 312 7-12 32 2 0 bp Feature: gene Location: 123286-123756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: JAAASC010000094.1 Escherichia coli strain 570 Ec-570_contig94, whole genome shotgun sequence (10475 bp)
Overview 1 RT 1: 6327-10244 bp Neighborhood of RT #1 [6327, 10246] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 6327-7151 bp Feature: gene Location: 7278-7568 bp Feature: domain Description: PHA02517 Location: 7284-7503 bp Feature: domain Description: PHA02517 Location: 7284-7503 bp Feature: gene Location: 8160-9683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8433-9165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 843 3 -9165 bp Feature: domain Description: GIIM Note: maturase Location: 9240-9438 bp Feature: domain Description: GIIM Note: maturase Location: 9240-943 8 bp Feature: gene Location: 9860-10246 bp Feature: domain Description: PHA02517 Location: 9863-10244 bp Feature: domain Description: PHA02517 Location: 9863 -10244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)