myRT

myRT report for GCA_009908325.1_ASM990832v1

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Seq: JAAAPI010000393.1 Verrucomicrobia bacterium isolate GSL.Bin9 NODE_11065_length_5735_cov_2.00695, whole genome shotgun sequence (5735 bp)
Overview 1 RT 1: 3-4891 bp Neighborhood of RT #1 [3, 4891] RVT-GII GIIM Feature: gene Location: 3-275 bp Feature: gene Location: 296-775 bp Feature: gene Location: 878-2203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1163-1781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 63-1 781 bp Feature: domain Description: GIIM Note: maturase Location: 1832-2048 bp Feature: domain Description: GIIM Note: maturase Location: 1 832-2048 bp Feature: gene Location: 2314-2847 bp Feature: gene Location: 2852-4891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAAPI010000294.1 Verrucomicrobia bacterium isolate GSL.Bin9 NODE_11884_length_5411_cov_1.28771, whole genome shotgun sequence (5411 bp)
Overview 1 RT 1: 296-2635 bp Neighborhood of RT #1 [296, 2635] RVT-UG7 Feature: gene Location: 296-1471 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 725-1148 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 72 5-1148 bp Feature: gene Location: 1700-1870 bp Feature: gene Location: 2099-2635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: JAAAPI010000269.1 Verrucomicrobia bacterium isolate GSL.Bin9 NODE_14734_length_4477_cov_0.899449, whole genome shotgun sequence (4477 bp)
Overview 1 RT 1: 1297-4190 bp Neighborhood of RT #1 [1297, 4190] Ion_trans_2 RVT-GII GIIM Feature: gene Location: 1297-1872 bp Feature: domain Description: Ion_trans_2 Location: 1516-1735 bp Feature: domain Description: Ion_trans_2 Location: 1516-173 5 bp Feature: gene Location: 1969-2298 bp Feature: gene Location: 2408-3799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2741-3410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2741-3 410 bp Feature: domain Description: GIIM Note: maturase Location: 3494-3692 bp Feature: domain Description: GIIM Note: maturase Location: 3 494-3 692 bp Feature: gene Location: 3828-4190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ion_trans_2 (pfam07885), RVT-GII, GIIM (pfam08388)

Seq: JAAAPI010000320.1 Verrucomicrobia bacterium isolate GSL.Bin9 NODE_15697_length_4244_cov_2.81033, whole genome shotgun sequence (4244 bp)
Overview 1 RT 1: 1149-4243 bp Neighborhood of RT #1 [1149, 4243] HEPN_RiboL-PSP RVT-GII GIIM Feature: gene Location: 1149-1583 bp Feature: gene Location: 1641-2324 bp Feature: domain Description: HEPN_RiboL-PSP Location: 1767-2286 bp Feature: domain Description: HEPN_RiboL-PSP Location: 1767-2286 bp Feature: gene Location: 2425-3741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2671-3292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2671-3292 bp Feature: domain Description: GIIM Note: maturase Location: 3334-3550 bp Feature: domain Description: GIIM Note: maturase Location: 3334 -3550 bp Feature: gene Location: 3734-4243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN_RiboL-PSP (pfam18735), RVT-GII, GIIM (pfam08388)

Seq: JAAAPI010000293.1 Verrucomicrobia bacterium isolate GSL.Bin9 NODE_18816_length_3599_cov_0.246118, whole genome shotgun sequence (3599 bp)
Overview 1 RT 1: 15-3532 bp Neighborhood of RT #1 [15, 3532] RVT-UG3 RVT-UG8 Feature: gene Location: 15-1247 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 300-783 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 300-783 bp Feature: gene Location: 1240-3246 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1774-2218 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1774-2218 bp Feature: gene Location: 3344-3532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, RVT-UG8

Seq: JAAAPI010000122.1 Verrucomicrobia bacterium isolate GSL.Bin9 NODE_21022_length_3259_cov_0.936265, whole genome shotgun sequence (3259 bp)
Overview 1 RT 1: 103-3093 bp Neighborhood of RT #1 [103, 3197] RVT-DGRs GIY-YIG_SLX1_like pfam03781 Feature: gene Location: 103-474 bp Feature: gene Location: 665-1888 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 773-1412 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 773-1412 bp Feature: gene Location: 1923-2186 bp Feature: domain Description: GIY-YIG_SLX1_like Location: 1932-2127 bp Feature: domain Description: GIY-YIG_SLX1_like Location: 1932-2127 bp Feature: gene Location: 2250-3197 bp Feature: domain Description: pfam03781 Location: 2397-3093 bp Feature: domain Description: pfam03781 Location: 2397-3093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, GIY-YIG_SLX1_like (cd10449), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: JAAAPI010000315.1 Verrucomicrobia bacterium isolate GSL.Bin9 NODE_216_length_54715_cov_0.669487, whole genome shotgun sequence (54715 bp)
Overview 1 RT 1: 19945-28234 bp Neighborhood of RT #1 [19945, 29985] KOG0990 RVT-UG19 YeeA met_A_Alw26 Feature: gene Location: 19945-20706 bp Feature: gene Location: 20696-21355 bp Feature: domain Description: KOG0990 Location: 21020-21314 bp Feature: domain Description: KOG0990 Location: 21020-21314 bp Feature: gene Location: 21358-23427 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 21721-22201 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 217 21-22201 bp Feature: gene Location: 23424-25454 bp Feature: gene Location: 25459-29985 bp Feature: domain Description: YeeA Location: 26908-27235 bp Feature: domain Description: YeeA Location: 26908-27 235 bp Feature: domain Description: met_A_Alw26 Location: 27742-28234 bp Feature: domain Description: met_A_Alw26 Location: 27 7 42-28234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0990 (KOG0990, Replication factor C, subunit RFC5 ), RVT-UG19, YeeA (COG1002), met_A_Alw26 (TIGR02987)

Seq: JAAAPI010000371.1 Verrucomicrobia bacterium isolate GSL.Bin9 NODE_22675_length_3037_cov_3.21742, whole genome shotgun sequence (3037 bp)
Overview 1 RT 1: 389-2520 bp Neighborhood of RT #1 [389, 2520] RVT-GII GIIM Feature: gene Location: 389-1756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1412 bp Feature: domain Description: GIIM Note: maturase Location: 1484-1700 bp Feature: domain Description: GIIM Note: maturase Location: 148 4-1700 bp Feature: gene Location: 1946-2140 bp Feature: gene Location: 2317-2520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAAPI010000272.1 Verrucomicrobia bacterium isolate GSL.Bin9 NODE_2518_length_16382_cov_1.05584, whole genome shotgun sequence (16382 bp)
Overview 1 RT 1: 13678-16380 bp Neighborhood of RT #1 [13678, 16380] Macro_Poa1p_like YwgA DarT RVT-GII GIIM Feature: gene Location: 13678-14793 bp Feature: domain Description: Macro_Poa1p_like Location: 13681-14071 bp Feature: domain Description: Macro_Poa1p_like Location: 13681-14071 bp Feature: domain Description: YwgA Location: 14209-14566 bp Feature: domain Description: YwgA Location: 14209 -14566 bp Feature: gene Location: 14803-15735 bp Feature: domain Description: DarT Location: 15253-15730 bp Feature: domain Description: DarT Location: 15253-15730 bp Feature: gene Location: 15568-16146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15571-15832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15571-15832 bp Feature: domain Description: GIIM Note: maturase Location: 15904-16114 bp Feature: domain Description: GIIM Note: maturase Location: 159 04-16114 bp Feature: gene Location: 16198-16380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Poa1p_like, YwgA (COG3465), DarT, RVT-GII, GIIM (pfam08388)

Seq: JAAAPI010000313.1 Verrucomicrobia bacterium isolate GSL.Bin9 NODE_2718_length_15595_cov_0.446103, whole genome shotgun sequence (15595 bp)
Overview 1 RT 1: 3147-6213 bp Neighborhood of RT #1 [3147, 6213] RVT-Retrons Feature: gene Location: 3147-3383 bp Feature: gene Location: 3834-4259 bp Feature: gene Location: 4228-5052 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4342-4885 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4342-4885 bp Feature: gene Location: 5216-5941 bp Feature: gene Location: 5983-6213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JAAAPI010000336.1 Verrucomicrobia bacterium isolate GSL.Bin9 NODE_3612_length_13080_cov_1.93186, whole genome shotgun sequence (13080 bp)
Overview 1 RT 1: 9201-12675 bp Neighborhood of RT #1 [9201, 12675] PRK00110 HipA_Ec_like RVT-GII GIIM Feature: gene Location: 9201-9953 bp Feature: domain Description: PRK00110 Location: 9204-9936 bp Feature: domain Description: PRK0011 0 Location: 9204-9936 bp Feature: gene Location: 10191-10616 bp Feature: domain Description: HipA_Ec_like Location: 10200-10584 bp Feature: domain Description: HipA_Ec_like Location: 10200-10584 bp Feature: gene Location: 11002-12387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11338-12013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11 338-12013 bp Feature: domain Description: GIIM Note: maturase Location: 12082-12298 bp Feature: domain Description: GIIM Note: maturase Location: 12082-12298 bp Feature: gene Location: 12502-12675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00110 (YebC/PmpR family DNA-binding transcriptional regulator), HipA_Ec_like (cd17808), RVT-GII, GIIM (pfam08388)

Seq: JAAAPI010000340.1 Verrucomicrobia bacterium isolate GSL.Bin9 NODE_865_length_28810_cov_1.73537, whole genome shotgun sequence (28810 bp)
Overview 1 RT 1: 631-4856 bp Neighborhood of RT #1 [631, 4858] Unstab_antitox RVT-GII RVT-GII RVT-GII GIIM PRK11409 YoeB_toxin Feature: gene Location: 631-1020 bp Feature: domain Description: Unstab_antitox Location: 856-997 bp Feature: domain Description: Unstab_antitox Location: 856-997 bp Feature: gene Location: 1341-1535 bp Feature: gene Location: 1597-2040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1603-1999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1603-1999 bp Feature: gene Location: 2041-2235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2158-2230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2158-2230 bp Feature: gene Location: 2432-4126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3044-3665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3044-3665 bp Feature: domain Description: GIIM Note: maturase Location: 3707-3923 bp Feature: domain Description: GIIM Note: maturase Location: 3707-3923 bp Feature: gene Location: 4356-4607 bp Feature: domain Description: PRK11409 Location: 4359-4602 bp Feature: domain Description: PRK11409 Location: 4359-4602 bp Feature: gene Location: 4604-4858 bp Feature: domain Description: YoeB_toxin Location: 4619-4856 bp Feature: domain Description: YoeB_toxin Location: 4619-4856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Unstab_antitox (pfam09720), RVT-GII, GIIM (pfam08388), PRK11409 (YoeB-YefM toxin-antitoxin system antitoxin YefM), YoeB_toxin (pfam06769)