myRT

myRT report for GCA_009908535.1_ASM990853v1

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Seq: JAAAOD010000132.1 Verrucomicrobia bacterium isolate GSL.Bin15 NODE_20046_length_3399_cov_0.725747, whole genome shotgun sequence (3399 bp)
Overview 1 RT 1: 819-2938 bp Neighborhood of RT #1 [819, 3318] HTH_Tnp_1 TnpB_IS66 RVT-GII Feature: gene Location: 819-1184 bp Feature: domain Description: HTH_Tnp_1 Location: 843-1002 bp Feature: domain Description: HTH_Tnp_1 Location: 843-1 002 bp Feature: gene Location: 1181-1846 bp Feature: domain Description: TnpB_IS66 Location: 1208-1493 bp Feature: domain Description: TnpB_IS66 Location: 1 208-1 493 bp Feature: gene Location: 1843-3318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2248-2938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2248-2938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII, HTH_Tnp_1 (pfam01527)

Seq: JAAAOD010000052.1 Verrucomicrobia bacterium isolate GSL.Bin15 NODE_9588_length_6419_cov_0.68101, whole genome shotgun sequence (6419 bp)
Overview 1 RT 1: 2803-6243 bp Neighborhood of RT #1 [2803, 6416] recomb_XerC NMT1 RVT-GII GIIM Feature: gene Location: 2803-3741 bp Feature: domain Description: recomb_XerC Location: 2848-3739 bp Feature: domain Description: recomb_XerC Location: 2 848-3739 bp Feature: gene Location: 3766-4770 bp Feature: domain Description: NMT1 Location: 3919-4519 bp Feature: domain Description: NMT1 Location: 3919-4519 bp Feature: gene Location: 4986-6416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5361-5979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5361-5979 bp Feature: domain Description: GIIM Note: maturase Location: 6027-6243 bp Feature: domain Description: GIIM Note: maturase Location: 602 7-62 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recomb_XerC (TIGR02224), NMT1 (pfam09084), RVT-GII, GIIM (pfam08388)