myRT

myRT report for GCA_009908845.1_ASM990884v1

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Seq: JAAAOQ010000098.1 Gammaproteobacteria bacterium isolate GSL.Bin27 NODE_3322_length_13785_cov_0.364535, whole genome shotgun sequence (13785 bp)
Overview 1 RT 1: 6966-10932 bp Neighborhood of RT #1 [6966, 10932] YdeI RVT-GII Feature: gene Location: 6966-7313 bp Feature: domain Description: YdeI Location: 7026-7296 bp Feature: domain Description: YdeI Location: 7026-7296 bp Feature: gene Location: 7954-8280 bp Feature: gene Location: 8477-8824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8615-8786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 861 5-8786 bp Feature: gene Location: 9098-10525 bp Feature: gene Location: 10654-10932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdeI (COG4430), RVT-GII

Seq: JAAAOQ010000061.1 Gammaproteobacteria bacterium isolate GSL.Bin27 NODE_5678_length_9603_cov_0.624341, whole genome shotgun sequence (9603 bp)
Overview 1 RT 1: 6274-9527 bp Neighborhood of RT #1 [6274, 9559] EndA COG5421 COG5421 RVT-GII RVT-GII group_II_RT_mat Feature: gene Location: 6274-6606 bp Feature: domain Description: EndA Location: 6280-6589 bp Feature: domain Description: EndA Location: 62 80-6589 bp Feature: gene Location: 6686-8365 bp Feature: domain Description: COG5421 Location: 7307-7526 bp Feature: domain Description: COG542 1 Location: 7307-752 6 bp Feature: domain Description: COG5421 Location: 7991-8219 bp Feature: domain Description: COG542 1 Location: 7991-82 19 bp Feature: gene Location: 8702-9559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8750-8882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8750-8882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8954-9143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8954-9143 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 9155-9527 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 9155-952 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EndA (COG2356), COG5421 (Transposase ), RVT-GII, group_II_RT_mat (TIGR04416)