myRT

myRT report for GCA_009908925.1_ASM990892v1

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Seq: JAAAOH010000360.1 Spirochaetes bacterium isolate GSL.Bin19 NODE_17595_length_3823_cov_0.399514, whole genome shotgun sequence (3823 bp)
Overview 1 RT 1: 2-2272 bp Neighborhood of RT #1 [2, 2418] RVT-GII GT4_PimA-like Feature: gene Location: 2-544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206-542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206-542 bp Feature: gene Location: 558-821 bp Feature: gene Location: 1114-2418 bp Feature: domain Description: GT4_PimA-like Location: 1183-2272 bp Feature: domain Description: GT4_PimA-like Location: 1 1 83-2272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT4_PimA-like (cd03801), RVT-GII

Seq: JAAAOH010000086.1 Spirochaetes bacterium isolate GSL.Bin19 NODE_3673_length_12938_cov_0.915893, whole genome shotgun sequence (12938 bp)
Overview 1 RT 1: 8045-12910 bp Neighborhood of RT #1 [8045, 12912] HATPase_c_2 Crp fadh2 RVT-GII GIIM rpsD Feature: gene Location: 8045-9349 bp Feature: domain Description: HATPase_c_2 Location: 8492-8933 bp Feature: domain Description: HATPase_c_2 Location: 8492 -8933 bp Feature: domain Description: Crp Location: 8993-9329 bp Feature: domain Description: Crp Location: 8993-932 9 bp Feature: gene Location: 9357-10313 bp Feature: domain Description: fadh2 Location: 9432-10272 bp Feature: domain Description: fadh2 Location: 9432 -102 72 bp Feature: gene Location: 10428-11801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10743-11364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10743-11364 bp Feature: domain Description: GIIM Note: maturase Location: 11412-11643 bp Feature: domain Description: GIIM Note: maturase Location: 11412 -11643 bp Feature: gene Location: 12298-12912 bp Feature: domain Description: rpsD Location: 12301-12910 bp Feature: domain Description: rpsD Location: 12 301-12 910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), rpsD (PRK05327), HATPase_c_2 (pfam13581), Crp (pfam00325), fadh2 (TIGR00676)