myRT

myRT report for GCA_009909085.1_ASM990908v1

Download annotations/find similar RTs

Seq: JAAANX010000159.1 Cyanobacteria bacterium GSL.Bin1 NODE_1060_length_25975_cov_5.17529, whole genome shotgun sequence (25975 bp)
Overview 1 RT 1: 935-5256 bp Neighborhood of RT #1 [935, 5639] RVT-UNC Uma2 YqiK Feature: gene Location: 935-1102 bp Feature: gene Location: 1255-1557 bp Feature: gene Location: 1664-3577 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2078-2606 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2078-2606 bp Feature: gene Location: 3737-4330 bp Feature: domain Description: Uma2 Location: 3779-4298 bp Feature: domain Description: Uma2 Location: 3779-4298 bp Feature: gene Location: 4380-5639 bp Feature: domain Description: YqiK Location: 4392-5256 bp Feature: domain Description: YqiK Location: 4392-5256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17/RVT-AbiA/RVT-UG25/RVT-UG5(RVT-UNC), Uma2 (pfam05685), YqiK (COG2268)

Seq: JAAANX010000143.1 Cyanobacteria bacterium GSL.Bin1 NODE_22737_length_3029_cov_0.220426, whole genome shotgun sequence (3029 bp)
Overview 1 RT 1: 3-2953 bp Neighborhood of RT #1 [3, 2964] YfmG RVT-DGRs Avd_like Feature: gene Location: 3-263 bp Feature: gene Location: 360-1328 bp Feature: domain Description: YfmG Location: 480-1311 bp Feature: domain Description: YfmG Location: 480-1311 bp Feature: gene Location: 1562-2380 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1568-2165 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1568-2 165 bp Feature: gene Location: 2626-2964 bp Feature: domain Description: Avd_like Location: 2644-2953 bp Feature: domain Description: Avd_like Location: 2 644-2 953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, Avd_like (cd16376)

Seq: JAAANX010000089.1 Cyanobacteria bacterium GSL.Bin1 NODE_799_length_30181_cov_5.19884, whole genome shotgun sequence (30181 bp)
Overview 1 RT 1: 441-3517 bp 2 RT 2: 17196-24533 bp Neighborhood of RT #1 [441, 3537] HTH_32 Avd_like RVT-DGRs PRK11670 Neighborhood of RT #2 [17196, 24544] COG4634 COG2442 RVT-AbiA AcrB RND_mfp RND_mfp Feature: gene Location: 441-818 bp Feature: domain Description: HTH_32 Location: 450-693 bp Feature: domain Description: HTH_3 2 Location: 450-693 bp Feature: gene Location: 1028-1381 bp Feature: domain Description: Avd_like Location: 1049-1355 bp Feature: domain Description: Avd_like Location: 1049-13 55 bp Feature: gene Location: 1378-1851 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1585-1759 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1585-1759 bp Feature: gene Location: 2010-2141 bp Feature: gene Location: 2476-3537 bp Feature: domain Description: PRK11670 Location: 2491-3517 bp Feature: domain Description: PRK11670 Location: 2491-3 517 bp Feature: gene Location: 17196-17498 bp Feature: domain Description: COG4634 Location: 17208-17484 bp Feature: domain Description: COG463 4 Location: 17208-17484 bp Feature: gene Location: 17531-17755 bp Feature: domain Description: COG2442 Location: 17537-17735 bp Feature: domain Description: COG2442 Location: 1753 7-1773 5 bp Feature: gene Location: 17848-19833 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 18319-18829 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 183 19-18829 bp Feature: gene Location: 20050-23166 bp Feature: domain Description: AcrB Location: 20053-23101 bp Feature: domain Description: AcrB Location: 20053 -23 101 bp Feature: gene Location: 23192-24544 bp Feature: domain Description: RND_mfp Location: 23405-23654 bp Feature: domain Description: RND_mfp Location: 23 405-23 654 bp Feature: domain Description: RND_mfp Location: 23894-24533 bp Feature: domain Description: RND_mfp Location: 23 894-2453 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), Avd_like (cd16376), RVT-DGRs, PRK11670 (iron-sulfur cluster carrier protein ApbC), COG4634 (Predicted nuclease, contains PIN domain, potential toxin-antitoxin system component ), COG2442 (Uncharacterized conserved protein, DUF433 family ), RVT-AbiA, AcrB (COG0841), RND_mfp (TIGR01730)