myRT

myRT report for GCA_009910575.1_DF166

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Seq: JAAAXN010000010.1 Serratia fonticola strain PE1_DF166 SQ25_ctg_10, whole genome shotgun sequence (134175 bp)
Overview 1 RT 1: 37405-41025 bp Neighborhood of RT #1 [37405, 41025] PRK15287 FimA RVT-UG4 Feature: gene Location: 37405-37896 bp Feature: domain Description: PRK15287 Location: 37408-37894 bp Feature: domain Description: PRK1 5287 Location: 37408-37894 bp Feature: gene Location: 37912-38445 bp Feature: domain Description: FimA Location: 37957-38443 bp Feature: domain Description: FimA Location: 37957-38443 bp Feature: gene Location: 38438-39385 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 38876-39317 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 38876-3931 7 bp Feature: gene Location: 39518-40495 bp Feature: gene Location: 40873-41025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), RVT-UG4

Seq: JAAAXN010000034.1 Serratia fonticola strain PE1_DF166 SQ25_ctg_34, whole genome shotgun sequence (203822 bp)
Overview 1 RT 1: 151560-155354 bp Neighborhood of RT #1 [151560, 155368] STAS_anti-anti-sigma_factors RVT-GII PRK09290 PucG Feature: gene Location: 151560-151892 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 151572-151857 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 151572 -151857 bp Feature: gene Location: 151968-152114 bp Feature: gene Location: 152433-152786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152508-152673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 508-152 673 bp Feature: gene Location: 152835-154121 bp Feature: domain Description: PRK09290 Location: 152871-154068 bp Feature: domain Description: PRK092 90 Location: 152 871-154068 bp Feature: gene Location: 154121-155368 bp Feature: domain Description: PucG Location: 154166-155354 bp Feature: domain Description: PucG Location: 154166-155354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STAS_anti-anti-sigma_factors (cd07043), RVT-GII, PRK09290 (allantoate amidohydrolase; Reviewed), PucG (COG0075)