myRT

myRT report for GCA_009911015.1_ASM991101v1

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Seq: QXWL01000002.1 Bacteroides sartorii strain 0.1XD21-62 Scaffold1_2, whole genome shotgun sequence (276206 bp)
Overview 1 RT 1: 3234-9512 bp Neighborhood of RT #1 [3234, 9512] Mfa_like_1 DUF1566 BF2867_like_N DUF1566 RVT_N RVT-GII GIIM Avd_like Feature: gene Location: 3234-5105 bp Feature: domain Description: Mfa_like_1 Location: 3408-4110 bp Feature: domain Description: Mfa_like_1 Location: 3408-41 1 0 bp Feature: domain Description: DUF1566 Location: 4737-5064 bp Feature: domain Description: DUF1 566 Location: 4737-5064 bp Feature: gene Location: 5124-6641 bp Feature: domain Description: BF2867_like_N Location: 5163-5661 bp Feature: domain Description: BF2867_like_N Location: 51 63-5661 bp Feature: domain Description: DUF1566 Location: 6366-6621 bp Feature: domain Description: DUF1 566 Location: 6366-6621 bp Feature: gene Location: 7255-8733 bp Feature: RT Description: RVT_N Location: 7309-7552 bp Feature: RT Description: RVT_N Location: 7309-7552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7597-8242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7597-8242 bp Feature: domain Description: GIIM Note: maturase Location: 8296-8530 bp Feature: domain Description: GIIM Note: maturase Location: 8296-8530 bp Feature: gene Location: 8934-9308 bp Feature: domain Description: Avd_like Location: 8961-9267 bp Feature: domain Description: Avd_like Location: 8961 -9267 bp Feature: gene Location: 9345-9512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mfa_like_1 (pfam13149), DUF1566 (pfam07603), BF2867_like_N (cd13120), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Avd_like (cd16376)

Seq: QXWL01000064.1 Bacteroides sartorii strain 0.1XD21-62 Scaffold51_1, whole genome shotgun sequence (28613 bp)
Overview 1 RT 1: 11135-17668 bp Neighborhood of RT #1 [11135, 17700] Relaxase Relaxase YWFCY RVT-GII Intron_maturas2 HNHc TraG-D_C RteC Feature: gene Location: 11135-12442 bp Feature: domain Description: Relaxase Location: 11285-11612 bp Feature: domain Description: Relaxase Location: 112 85-11612 bp Feature: domain Description: Relaxase Location: 11942-12155 bp Feature: domain Description: Relaxase Location: 11942 -12 155 bp Feature: gene Location: 12467-13198 bp Feature: domain Description: YWFCY Location: 12476-12653 bp Feature: domain Description: YWFCY Location: 12 476-12 653 bp Feature: gene Location: 13736-15547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14000-14822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14000-1482 2 bp Feature: domain Description: Intron_maturas2 Location: 14897-15203 bp Feature: domain Description: Intron_maturas2 Location: 14897-152 03 bp Feature: domain Description: HNHc Note: nucleases Location: 15377-15521 bp Feature: domain Description: HNHc Note: nucleases Location: 15377-1552 1 bp Feature: gene Location: 15534-16967 bp Feature: domain Description: TraG-D_C Location: 16341-16674 bp Feature: domain Description: TraG-D_C Location: 16341-16674 bp Feature: gene Location: 17098-17700 bp Feature: domain Description: RteC Location: 17359-17668 bp Feature: domain Description: RteC Location: 17359-17668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), RteC (pfam09357)

Seq: QXWL01000087.1 Bacteroides sartorii strain 0.1XD21-62 Scaffold74_1, whole genome shotgun sequence (9855 bp)
Overview 1 RT 1: 6924-9317 bp Neighborhood of RT #1 [6924, 9673] PRK07983 PRK07983 RVT-GII Feature: gene Location: 6924-7577 bp Feature: domain Description: PRK07983 Location: 7275-7359 bp Feature: domain Description: PRK07983 Location: 7275-73 59 bp Feature: domain Description: PRK07983 Location: 7446-7536 bp Feature: domain Description: PRK07983 Location: 7446-753 6 bp Feature: gene Location: 7595-8164 bp Feature: gene Location: 8468-9673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8654-9317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8654-93 17 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07983 (exodeoxyribonuclease X; Provisional), RVT-GII

Seq: QXWL01000112.1 Bacteroides sartorii strain 0.1XD21-62 Scaffold99_1, whole genome shotgun sequence (2416 bp)
Overview 1 RT 1: 122-2415 bp Neighborhood of RT #1 [122, 2415] RVT_N RVT-GII GIIM Feature: gene Location: 122-1774 bp Feature: RT Description: RVT_N Location: 176-419 bp Feature: RT Description: RVT_N Location: 176-4 19 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 64 -1112 bp Feature: domain Description: GIIM Note: maturase Location: 1166-1397 bp Feature: domain Description: GIIM Note: maturase Location: 1166-1397 bp Feature: gene Location: 1856-2029 bp Feature: gene Location: 2221-2415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)