myRT

myRT report for GCA_009911195.1_ASM991119v1

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Seq: QXWV01000115.1 Lachnospiraceae bacterium strain 526-35 Scaffold18_2, whole genome shotgun sequence (96732 bp)
Overview 1 RT 1: 56931-59506 bp Neighborhood of RT #1 [56931, 59511] Phage_XkdX RVT-DGRs Phage_holin_Dp1 Feature: gene Location: 56931-57071 bp Feature: domain Description: Phage_XkdX Location: 56952-57069 bp Feature: domain Description: Phage_XkdX Location: 56952-57069 bp Feature: gene Location: 57158-57565 bp Feature: gene Location: 57771-58988 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57966-58683 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57966-58683 bp Feature: gene Location: 58989-59324 bp Feature: gene Location: 59311-59511 bp Feature: domain Description: Phage_holin_Dp1 Location: 59320-59506 bp Feature: domain Description: Phage_holin_Dp1 Location: 59320-59506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs, Phage_holin_Dp1 (pfam16938)

Seq: QXWV01000123.1 Lachnospiraceae bacterium strain 526-35 Scaffold21_3, whole genome shotgun sequence (49915 bp)
Overview 1 RT 1: 17887-25240 bp Neighborhood of RT #1 [17887, 25240] AE_Prim_S_like RVT-UG10 Feature: gene Location: 17887-18150 bp Feature: gene Location: 18443-21103 bp Feature: gene Location: 21097-23619 bp Feature: domain Description: AE_Prim_S_like Location: 21244-21472 bp Feature: domain Description: AE_Prim_S_like Location: 2 12 44-2 1472 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 22429-23059 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 2 2 42 9-2 3059 bp Feature: gene Location: 23973-24902 bp Feature: gene Location: 25031-25240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AE_Prim_S_like (cl01287), RVT-UG10

Seq: QXWV01000145.1 Lachnospiraceae bacterium strain 526-35 Scaffold28_1, whole genome shotgun sequence (34841 bp)
Overview 1 RT 1: 28375-32746 bp Neighborhood of RT #1 [28375, 32748] PrgI RVT-GII HNHc Maff2 Feature: gene Location: 28375-28779 bp Feature: domain Description: PrgI Location: 28396-28666 bp Feature: domain Description: PrgI Location: 283 96-28666 bp Feature: gene Location: 28853-29725 bp Feature: gene Location: 29986-31860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30313-31051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 03 13 -3 1051 bp Feature: domain Description: HNHc Note: nucleases Location: 31591-31747 bp Feature: domain Description: HNHc Note: nucleases Location: 3 1591-3 1747 bp Feature: gene Location: 32163-32351 bp Feature: gene Location: 32617-32748 bp Feature: domain Description: Maff2 Location: 32620-32746 bp Feature: domain Description: Maff2 Location: 3 2620-3 2746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), RVT-GII, HNHc (smart00507), Maff2 (pfam12750)