myRT

myRT report for GCA_009911355.1_ASM991135v1

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Seq: QXXE01000013.1 Clostridiaceae bacterium strain 9 Scaffold11_1, whole genome shotgun sequence (76135 bp)
Overview 1 RT 1: 23583-29104 bp Neighborhood of RT #1 [23583, 29104] FN3 FN3 RVT-DGRs Avd_like Feature: gene Location: 23583-23780 bp Feature: gene Location: 24302-26161 bp Feature: domain Description: FN3 Location: 24989-25217 bp Feature: domain Description: FN3 Location: 24989-2521 7 bp Feature: domain Description: FN3 Location: 25280-25541 bp Feature: domain Description: FN3 Location: 25280-25541 bp Feature: gene Location: 26186-27427 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 26447-27056 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 26447-27056 bp Feature: gene Location: 27770-28357 bp Feature: domain Description: Avd_like Location: 27977-28250 bp Feature: domain Description: Avd_like Location: 27977-28250 bp Feature: gene Location: 28373-29104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FN3 (smart00060), RVT-DGRs, Avd_like (cd16376)

Seq: QXXE01000014.1 Clostridiaceae bacterium strain 9 Scaffold12_1, whole genome shotgun sequence (75236 bp)
Overview 1 RT 1: 38261-43065 bp Neighborhood of RT #1 [38261, 43490] DUF4376 RVT-DGRs Avd_like DUF3751 Feature: gene Location: 38261-38749 bp Feature: domain Description: DUF4376 Location: 38375-38603 bp Feature: domain Description: DUF4376 Location: 38375-38603 bp Feature: gene Location: 38746-40464 bp Feature: gene Location: 40464-41588 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40668-41334 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40668-41334 bp Feature: gene Location: 41954-42385 bp Feature: domain Description: Avd_like Location: 41999-42335 bp Feature: domain Description: Avd_like Location: 41999-42 335 bp Feature: gene Location: 42606-43490 bp Feature: domain Description: DUF3751 Location: 42627-43065 bp Feature: domain Description: DUF3751 Location: 42 62 7-43065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4376 (pfam14301), RVT-DGRs, Avd_like (cd16376), DUF3751 (pfam12571)

Seq: QXXE01000016.1 Clostridiaceae bacterium strain 9 Scaffold14_1, whole genome shotgun sequence (71334 bp)
Overview 1 RT 1: 46642-51470 bp Neighborhood of RT #1 [46642, 51470] DUF3751 Avd_like RVT-DGRs Feature: gene Location: 46642-47520 bp Feature: domain Description: DUF3751 Location: 46657-47098 bp Feature: domain Description: DUF3 751 Location: 46657-47098 bp Feature: gene Location: 47744-48166 bp Feature: domain Description: Avd_like Location: 47774-48110 bp Feature: domain Description: Avd_like Location: 47774-48110 bp Feature: gene Location: 48461-49573 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 48659-49325 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 48659-493 25 bp Feature: gene Location: 49558-51285 bp Feature: gene Location: 51285-51470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3751 (pfam12571), Avd_like (cd16376), RVT-DGRs

Seq: QXXE01000018.1 Clostridiaceae bacterium strain 9 Scaffold16_1, whole genome shotgun sequence (65873 bp)
Overview 1 RT 1: 19478-25088 bp Neighborhood of RT #1 [19478, 25088] FN3 FN3 RVT-DGRs Avd_like Feature: gene Location: 19478-19651 bp Feature: gene Location: 19651-21510 bp Feature: domain Description: FN3 Location: 20362-20572 bp Feature: domain Description: FN3 Location: 20362-20572 bp Feature: domain Description: FN3 Location: 20635-20866 bp Feature: domain Description: FN3 Location: 20635-20866 bp Feature: gene Location: 21587-22774 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21779-22391 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21779-22391 bp Feature: gene Location: 23199-23801 bp Feature: domain Description: Avd_like Location: 23406-23679 bp Feature: domain Description: Avd_like Location: 234 06-23679 bp Feature: gene Location: 24153-25088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FN3 (smart00060), RVT-DGRs, Avd_like (cd16376)

Seq: QXXE01000034.1 Clostridiaceae bacterium strain 9 Scaffold32_1, whole genome shotgun sequence (40865 bp)
Overview 1 RT 1: 304-2738 bp Neighborhood of RT #1 [304, 2761] RVT-GII Intron_maturas2 SR_TndX_transposase Feature: gene Location: 304-462 bp Feature: gene Location: 507-2390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840-1662 bp Feature: domain Description: Intron_maturas2 Location: 1734-2043 bp Feature: domain Description: Intron_maturas2 Location: 1734-2043 bp Feature: gene Location: 2387-2551 bp Feature: gene Location: 2606-2761 bp Feature: domain Description: SR_TndX_transposase Location: 2639-2738 bp Feature: domain Description: SR_TndX_transposase Location: 2639-2738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), RVT-GII, Intron_maturas2 (pfam01348)

Seq: QXXE01000050.1 Clostridiaceae bacterium strain 9 Scaffold48_1, whole genome shotgun sequence (30858 bp)
Overview 1 RT 1: 23433-29177 bp Neighborhood of RT #1 [23433, 29419] Integrase_DNA Phage_int_SAM_3 INT_ICEBs1_C_like SpaA SpaA SpaA SpaA SpaA RVT-GII HNHc SpaA Feature: gene Location: 23433-24704 bp Feature: domain Description: Integrase_DNA Location: 23436-23643 bp Feature: domain Description: Integrase_DNA Location: 23436 -236 43 bp Feature: domain Description: Phage_int_SAM_3 Location: 23685-23850 bp Feature: domain Description: Phage_int_SAM_3 Location: 236 85-23850 bp Feature: domain Description: INT_ICEBs1_C_like Location: 24030-24639 bp Feature: domain Description: INT_ICEBs1_C_like Location: 24030-246 39 bp Feature: gene Location: 24883-26121 bp Feature: domain Description: SpaA Location: 24892-24958 bp Feature: domain Description: SpaA Location: 24892-24958 bp Feature: domain Description: SpaA Location: 25033-25270 bp Feature: domain Description: SpaA Location: 25033-25270 bp Feature: domain Description: SpaA Location: 25345-25570 bp Feature: domain Description: SpaA Location: 25345-25570 bp Feature: domain Description: SpaA Location: 25642-25831 bp Feature: domain Description: SpaA Location: 256 42-25831 bp Feature: domain Description: SpaA Location: 25915-26101 bp Feature: domain Description: SpaA Location: 25915-26 101 bp Feature: gene Location: 26251-28176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26569-27301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26 56 9-27301 bp Feature: domain Description: HNHc Note: nucleases Location: 27913-28048 bp Feature: domain Description: HNHc Note: nucleases Location: 27913-28048 bp Feature: gene Location: 28327-28527 bp Feature: gene Location: 28940-29419 bp Feature: domain Description: SpaA Location: 29000-29177 bp Feature: domain Description: SpaA Location: 29000-29177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_DNA (pfam02920), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), SpaA (pfam17802), RVT-GII, HNHc (smart00507)

Seq: QXXE01000052.1 Clostridiaceae bacterium strain 9 Scaffold50_1, whole genome shotgun sequence (29547 bp)
Overview 1 RT 1: 6047-8808 bp Neighborhood of RT #1 [6047, 8808] RVT-DGRs Feature: gene Location: 6047-6316 bp Feature: gene Location: 6331-6729 bp Feature: gene Location: 6791-7966 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7070-7670 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7 07 0-7 67 0 bp Feature: gene Location: 8100-8318 bp Feature: gene Location: 8344-8808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QXXE01000010.1 Clostridiaceae bacterium strain 9 Scaffold8_1, whole genome shotgun sequence (89352 bp)
Overview 1 RT 1: 17419-22260 bp Neighborhood of RT #1 [17419, 22745] FN3 FN3 RVT-DGRs Avd_like DUF3751 Feature: gene Location: 17419-17607 bp Feature: gene Location: 17607-19460 bp Feature: domain Description: FN3 Location: 18282-18516 bp Feature: domain Description: FN3 Location: 18 28 2-18 516 bp Feature: domain Description: FN3 Location: 18579-18816 bp Feature: domain Description: FN3 Location: 18 579-18 8 16 bp Feature: gene Location: 19490-20701 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19685-20345 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1968 5-20345 bp Feature: gene Location: 21093-21725 bp Feature: domain Description: Avd_like Location: 21303-21579 bp Feature: domain Description: Avd_like Location: 21303-21579 bp Feature: gene Location: 21966-22745 bp Feature: domain Description: DUF3751 Location: 21969-22260 bp Feature: domain Description: DUF3751 Location: 21969-22260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FN3 (smart00060), RVT-DGRs, Avd_like (cd16376), DUF3751 (pfam12571)