myRT

myRT report for GCA_009911535.1_ASM991153v1

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Seq: QWKD01000329.1 Parabacteroides goldsteinii strain 526-21 Scaffold114_1, whole genome shotgun sequence (2507 bp)
Overview 1 RT 1: 104-2373 bp Neighborhood of RT #1 [104, 2373] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 104-1927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1 1 90 bp Feature: domain Description: Intron_maturas2 Location: 1364-1607 bp Feature: domain Description: Intron_maturas2 Location: 1 364-1 607 bp Feature: domain Description: HNHc Note: nucleases Location: 1718-1889 bp Feature: domain Description: HNHc Note: nucleases Location: 1 71 8-1 889 bp Feature: gene Location: 2185-2373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: QWKD01000330.1 Parabacteroides goldsteinii strain 526-21 Scaffold115_1, whole genome shotgun sequence (2431 bp)
Overview 1 RT 1: 3-2328 bp Neighborhood of RT #1 [3, 2328] RVT_N RVT-GII GIIM Feature: gene Location: 3-137 bp Feature: gene Location: 140-1795 bp Feature: RT Description: RVT_N Location: 197-434 bp Feature: RT Description: RVT_N Location: 197-434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485-1133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485-1133 bp Feature: domain Description: GIIM Note: maturase Location: 1190-1421 bp Feature: domain Description: GIIM Note: maturase Location: 1190-142 1 bp Feature: gene Location: 2077-2328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QWKD01000331.1 Parabacteroides goldsteinii strain 526-21 Scaffold116_1, whole genome shotgun sequence (2417 bp)
Overview 1 RT 1: 97-1378 bp Neighborhood of RT #1 [97, 1779] RVT_N RVT-GII GIIM Feature: gene Location: 97-1779 bp Feature: RT Description: RVT_N Location: 151-394 bp Feature: RT Description: RVT_N Location: 151-3 94 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-1093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 9-1093 bp Feature: domain Description: GIIM Note: maturase Location: 1147-1378 bp Feature: domain Description: GIIM Note: maturase Location: 1147-13 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QWKD01000363.1 Parabacteroides goldsteinii strain 526-21 Scaffold137_1, whole genome shotgun sequence (842 bp)
Overview 1 RT 1: 14-590 bp Neighborhood of RT #1 [14, 841] RVT-GII Feature: gene Location: 14-841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17-590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17-590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QWKD01000259.1 Parabacteroides goldsteinii strain 526-21 Scaffold88_1, whole genome shotgun sequence (6735 bp)
Overview 1 RT 1: 4603-6735 bp Neighborhood of RT #1 [4603, 6734] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Feature: gene Location: 4603-5619 bp Feature: domain Description: Arm-DNA-bind_5 Location: 4633-4882 bp Feature: domain Description: Arm-DNA-bind_5 Location: 4633-4882 bp Feature: domain Description: Phage_int_SAM_5 Location: 4930-5239 bp Feature: domain Description: Phage_int_SAM_5 Location: 4930-5 239 bp Feature: domain Description: INTN1_C_like Location: 5290-5596 bp Feature: domain Description: INTN1_C_like Location: 5 290-5 5 96 bp Feature: gene Location: 6016-6156 bp Feature: gene Location: 6162-6734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6426-6735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6426-6735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII