myRT

myRT report for GCA_009911555.1_ASM991155v1

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Seq: QWKE01000108.1 Muribaculaceae bacterium Z1 Scaffold103_1, whole genome shotgun sequence (4243 bp)
Overview 1 RT 1: 63-3831 bp Neighborhood of RT #1 [63, 3831] PRK11071 RVT-Retrons WYL Feature: gene Location: 63-689 bp Feature: domain Description: PRK11071 Location: 72-444 bp Feature: domain Description: PRK1 1 071 Location: 72-444 bp Feature: gene Location: 686-1798 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 908-1484 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 908-1 484 bp Feature: gene Location: 2087-3010 bp Feature: domain Description: WYL Location: 2459-2990 bp Feature: domain Description: WYL Location: 2459-2990 bp Feature: gene Location: 3010-3831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), PRK11071 (esterase YqiA; Provisional), RVT-Retrons

Seq: QWKE01000024.1 Muribaculaceae bacterium Z1 Scaffold21_1, whole genome shotgun sequence (52372 bp)
Overview 1 RT 1: 15837-20808 bp Neighborhood of RT #1 [15837, 20808] RVT-DGRs Avd_like Feature: gene Location: 15837-16235 bp Feature: gene Location: 16325-17245 bp Feature: gene Location: 17250-19100 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17661-18354 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17661-18354 bp Feature: gene Location: 19103-19477 bp Feature: domain Description: Avd_like Location: 19136-19448 bp Feature: domain Description: Avd_like Location: 19136-19448 bp Feature: gene Location: 19606-20808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: QWKE01000002.1 Muribaculaceae bacterium Z1 Scaffold2_1, whole genome shotgun sequence (137220 bp)
Overview 1 RT 1: 2565-6190 bp 2 RT 2: 90629-102325 bp Neighborhood of RT #1 [2565, 6190] RVT-DGRs Neighborhood of RT #2 [90629, 102325] RVT-DGRs Feature: gene Location: 2565-2951 bp Feature: gene Location: 2948-3379 bp Feature: gene Location: 3339-4478 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3645-4245 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 645-4245 bp Feature: gene Location: 4542-4730 bp Feature: gene Location: 4820-6190 bp Feature: gene Location: 90629-91099 bp Feature: gene Location: 91078-91572 bp Feature: gene Location: 91580-93193 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 91853-92528 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 91853 -92528 bp Feature: gene Location: 93615-101795 bp Feature: gene Location: 101813-102325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QWKE01000003.1 Muribaculaceae bacterium Z1 Scaffold3_1, whole genome shotgun sequence (136328 bp)
Overview 1 RT 1: 103122-107824 bp Neighborhood of RT #1 [103122, 107824] RVT-DGRs Feature: gene Location: 103122-103988 bp Feature: gene Location: 104000-104371 bp Feature: gene Location: 104384-105745 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 104588-105182 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 104 588-105182 bp Feature: gene Location: 105752-106108 bp Feature: gene Location: 106328-107824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QWKE01000047.1 Muribaculaceae bacterium Z1 Scaffold44_1, whole genome shotgun sequence (27307 bp)
Overview 1 RT 1: 11744-23062 bp Neighborhood of RT #1 [11744, 23062] DUF4376 RVT-DGRs Feature: gene Location: 11744-12229 bp Feature: gene Location: 12226-12717 bp Feature: domain Description: DUF4376 Location: 12418-12691 bp Feature: domain Description: DUF4376 Location: 12418-12691 bp Feature: gene Location: 12802-14286 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13183-13786 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13183-13786 bp Feature: gene Location: 14639-19825 bp Feature: gene Location: 19871-23062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4376 (pfam14301), RVT-DGRs

Seq: QWKE01000010.1 Muribaculaceae bacterium Z1 Scaffold8_1, whole genome shotgun sequence (90988 bp)
Overview 1 RT 1: 48118-58321 bp Neighborhood of RT #1 [48118, 58359] Laminin_G_3 CotH LRR_AMN1 RVT-DGRs Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 48118-54879 bp Feature: domain Description: Laminin_G_3 Location: 50536-50965 bp Feature: domain Description: Laminin_G_3 Location: 50536 -5096 5 bp Feature: domain Description: CotH Location: 51757-52075 bp Feature: domain Description: CotH Location: 51757-52075 bp Feature: domain Description: LRR_AMN1 Location: 52660-53143 bp Feature: domain Description: LRR_AMN1 Location: 526 6 0-53143 bp Feature: gene Location: 54989-55252 bp Feature: gene Location: 55288-56721 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55507-56104 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55507-56 104 bp Feature: gene Location: 56752-57198 bp Feature: gene Location: 57205-58359 bp Feature: domain Description: Arm-DNA-bind_5 Location: 57238-57469 bp Feature: domain Description: Arm-DNA-bind_5 Location: 57238-5746 9 bp Feature: domain Description: Phage_int_SAM_5 Location: 57517-57799 bp Feature: domain Description: Phage_int_SAM_5 Location: 57517-57799 bp Feature: domain Description: INTN1_C_like Location: 57847-58321 bp Feature: domain Description: INTN1_C_like Location: 57847-58321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), CotH (pfam08757), LRR_AMN1 (sd00034), RVT-DGRs, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)