myRT

myRT report for GCA_009915125.1_ASM991512v1

Download annotations/find similar RTs

Seq: JAABLT010000017.1 Proteus sp. G2673 contig17, whole genome shotgun sequence (120939 bp)
Overview 1 RT 1: 79083-84255 bp Neighborhood of RT #1 [79083, 84269] TIGR02646 COG3950 RVT-Retrons PRK10238 MgrB Feature: gene Location: 79083-79733 bp Feature: domain Description: TIGR02646 Location: 79149-79563 bp Feature: domain Description: TIGR02646 Location: 791 49-79563 bp Feature: gene Location: 79736-81361 bp Feature: domain Description: COG3950 Location: 79931-81275 bp Feature: domain Description: COG3950 Location: 79931 -81 275 bp Feature: gene Location: 81363-82301 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 81465-82065 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 81 465-82065 bp Feature: gene Location: 82557-83939 bp Feature: domain Description: PRK10238 Location: 82569-83895 bp Feature: domain Description: PRK1 0238 Location: 82569-83895 bp Feature: gene Location: 84093-84269 bp Feature: domain Description: MgrB Location: 84174-84255 bp Feature: domain Description: MgrB Location: 841 74-84255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10238 (aromatic amino acid transporter AroP), MgrB (pfam13998)

Seq: JAABLT010000008.1 Proteus sp. G2673 contig8, whole genome shotgun sequence (175343 bp)
Overview 1 RT 1: 26853-34966 bp Neighborhood of RT #1 [26853, 34977] lexA PRK11639 RVT-GII Intron_maturas2 HNHc PRK09010 uvrA Feature: gene Location: 26853-27464 bp Feature: domain Description: lexA Location: 26856-27453 bp Feature: domain Description: lexA Location: 2 6856-2 7453 bp Feature: gene Location: 27902-28432 bp Feature: domain Description: PRK11639 Location: 27908-28388 bp Feature: domain Description: PRK11639 Location: 2 7908-2 8388 bp Feature: gene Location: 28840-30744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29131-29965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9131-2 9965 bp Feature: domain Description: Intron_maturas2 Location: 30076-30478 bp Feature: domain Description: Intron_maturas2 Location: 30076-30478 bp Feature: domain Description: HNHc Note: nucleases Location: 30523-30685 bp Feature: domain Description: HNHc Note: nucleases Location: 3052 3-30685 bp Feature: gene Location: 31366-31998 bp Feature: domain Description: PRK09010 Location: 31477-31996 bp Feature: domain Description: PRK09010 Location: 31477-31996 bp Feature: gene Location: 32083-34977 bp Feature: domain Description: uvrA Location: 32146-34966 bp Feature: domain Description: uvrA Location: 32 146-34966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lexA (TIGR00498), PRK11639 (zinc uptake transcriptional repressor Zur), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK09010 (single-stranded DNA-binding protein; Provisional), uvrA (PRK00349)