myRT

myRT report for GCA_009915295.1_ASM991529v1

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Seq: JAABLY010000012.1 Proteus sp. G2667 contig12, whole genome shotgun sequence (175293 bp)
Overview 1 RT 1: 26853-34967 bp Neighborhood of RT #1 [26853, 34978] lexA PRK11639 RVT-GII Intron_maturas2 HNHc PRK09010 uvrA Feature: gene Location: 26853-27464 bp Feature: domain Description: lexA Location: 26856-27453 bp Feature: domain Description: lexA Location: 26856-27453 bp Feature: gene Location: 27902-28432 bp Feature: domain Description: PRK11639 Location: 27908-28388 bp Feature: domain Description: PRK1 1 639 Location: 27908-28388 bp Feature: gene Location: 28841-30745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29132-29966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 32-29966 bp Feature: domain Description: Intron_maturas2 Location: 30077-30479 bp Feature: domain Description: Intron_maturas2 Location: 30077-30479 bp Feature: domain Description: HNHc Note: nucleases Location: 30524-30686 bp Feature: domain Description: HNHc Note: nucleases Location: 30524-30686 bp Feature: gene Location: 31367-31999 bp Feature: domain Description: PRK09010 Location: 31478-31997 bp Feature: domain Description: PRK0901 0 Location: 31 478-31 997 bp Feature: gene Location: 32084-34978 bp Feature: domain Description: uvrA Location: 32147-34967 bp Feature: domain Description: uvrA Location: 321 47-34967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lexA (TIGR00498), PRK11639 (zinc uptake transcriptional repressor Zur), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK09010 (single-stranded DNA-binding protein; Provisional), uvrA (PRK00349)

Seq: JAABLY010000030.1 Proteus sp. G2667 contig30, whole genome shotgun sequence (254406 bp)
Overview 1 RT 1: 223424-227320 bp Neighborhood of RT #1 [223424, 227379] RVT-UG11 Arm-DNA-bind_2 Phage_int_SAM_5 INT_ICEBs1_C_like Feature: gene Location: 223424-223567 bp Feature: gene Location: 223604-223897 bp Feature: gene Location: 224746-225513 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 224881-225331 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 2 4881-2 2 5331 bp Feature: gene Location: 225538-225921 bp Feature: gene Location: 226207-227379 bp Feature: domain Description: Arm-DNA-bind_2 Location: 226237-226441 bp Feature: domain Description: Arm-DNA-bind_2 Location: 2 2 62 37-2 2 6441 bp Feature: domain Description: Phage_int_SAM_5 Location: 226483-226738 bp Feature: domain Description: Phage_int_SAM_5 Location: 2 2 6483-2 2 6738 bp Feature: domain Description: INT_ICEBs1_C_like Location: 226822-227320 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2 2 682 2 -2 2 732 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, Arm-DNA-bind_2 (pfam12167), Phage_int_SAM_5 (pfam13102), INT_ICEBs1_C_like (cd01189)

Seq: JAABLY010000031.1 Proteus sp. G2667 contig31, whole genome shotgun sequence (267955 bp)
Overview 1 RT 1: 243545-248717 bp Neighborhood of RT #1 [243545, 248731] TIGR02646 COG3950 RVT-Retrons PRK10238 MgrB Feature: gene Location: 243545-244195 bp Feature: domain Description: TIGR02646 Location: 243611-244025 bp Feature: domain Description: TIGR02646 Location: 243 611-244025 bp Feature: gene Location: 244198-245823 bp Feature: domain Description: COG3950 Location: 244393-245737 bp Feature: domain Description: COG3 950 Location: 2443 93 -24573 7 bp Feature: gene Location: 245825-246763 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 245927-246527 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 245927-246527 bp Feature: gene Location: 247019-248401 bp Feature: domain Description: PRK10238 Location: 247031-248357 bp Feature: domain Description: PRK1023 8 Location: 24703 1-2483 57 bp Feature: gene Location: 248555-248731 bp Feature: domain Description: MgrB Location: 248636-248717 bp Feature: domain Description: MgrB Location: 24863 6-248717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10238 (aromatic amino acid transporter AroP), MgrB (pfam13998)