myRT

myRT report for GCA_009915355.1_ASM991535v1

Download annotations/find similar RTs

Seq: JAABMA010000016.1 Proteus sp. G2665 contig16, whole genome shotgun sequence (180002 bp)
Overview 1 RT 1: 19677-23270 bp Neighborhood of RT #1 [19677, 23296] COG3499 D RVT-UG12 PRK09678 PRK10040 Feature: gene Location: 19677-19877 bp Feature: domain Description: COG3499 Location: 19722-19836 bp Feature: domain Description: COG3499 Location: 1 9722-1 9836 bp Feature: gene Location: 19877-20977 bp Feature: domain Description: D Location: 19898-20954 bp Feature: domain Description: D Location: 1 9898-20954 bp Feature: gene Location: 20998-22716 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 21355-21808 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 21 355-21 808 bp Feature: gene Location: 22828-23046 bp Feature: domain Description: PRK09678 Location: 22831-23038 bp Feature: domain Description: PRK09678 Location: 22831 -23038 bp Feature: gene Location: 23093-23296 bp Feature: domain Description: PRK10040 Location: 23123-23270 bp Feature: domain Description: PRK1 0040 Location: 231 23-23270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3499 (Phage protein U ), D (PHA02561), RVT-UG12, PRK09678 (DNA-binding transcriptional regulator; Provisional), PRK10040 (hypothetical protein; Provisional)

Seq: JAABMA010000019.1 Proteus sp. G2665 contig19, whole genome shotgun sequence (50474 bp)
Overview 1 RT 1: 42854-47559 bp Neighborhood of RT #1 [42854, 47579] InsE PHA02517 RVT-GII GIIM COG3547 PHA02517 Feature: gene Location: 42854-43156 bp Feature: domain Description: InsE Location: 42863-43142 bp Feature: domain Description: InsE Location: 42 863-43142 bp Feature: gene Location: 43183-43608 bp Feature: domain Description: PHA02517 Location: 43207-43543 bp Feature: domain Description: PHA02 517 Location: 432 07-43543 bp Feature: gene Location: 44200-45723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44473-45205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44473-452 05 bp Feature: domain Description: GIIM Note: maturase Location: 45280-45478 bp Feature: domain Description: GIIM Note: maturase Location: 452 80-45478 bp Feature: gene Location: 46287-47351 bp Feature: domain Description: COG3547 Location: 46323-47229 bp Feature: domain Description: COG3547 Location: 4632 3-472 2 9 bp Feature: gene Location: 47373-47579 bp Feature: domain Description: PHA02517 Location: 47376-47559 bp Feature: domain Description: PHA02 517 Location: 47376-47559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: JAABMA010000020.1 Proteus sp. G2665 contig20, whole genome shotgun sequence (230286 bp)
Overview 1 RT 1: 222611-227766 bp Neighborhood of RT #1 [222611, 227766] AAA_15 TOPRIM_OLD RVT-Retrons Feature: gene Location: 222611-224536 bp Feature: domain Description: AAA_15 Location: 222614-223793 bp Feature: domain Description: AAA_15 Location: 222614-223 793 bp Feature: domain Description: TOPRIM_OLD Location: 223982-224234 bp Feature: domain Description: TOPRIM_OLD Location: 223 982-22423 4 bp Feature: gene Location: 224566-225576 bp Feature: gene Location: 225680-226660 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 225845-226400 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 225845-226400 bp Feature: gene Location: 226758-227498 bp Feature: gene Location: 227503-227766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-Retrons