myRT

myRT report for GCA_009915565.1_ASM991556v1

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Seq: JAABMH010000101.1 Proteus sp. G2658 contig101, whole genome shotgun sequence (76540 bp)
Overview 1 RT 1: 63202-66544 bp Neighborhood of RT #1 [63202, 66981] RVT-UG11 DUF2971 Feature: gene Location: 63202-63345 bp Feature: gene Location: 63382-63675 bp Feature: gene Location: 64524-65291 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 64659-65109 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 64659-651 09 bp Feature: gene Location: 65316-65699 bp Feature: gene Location: 66034-66981 bp Feature: domain Description: DUF2971 Location: 66271-66544 bp Feature: domain Description: DUF2971 Location: 66271 -66544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, DUF2971 (pfam11185)

Seq: JAABMH010000030.1 Proteus sp. G2658 contig30, whole genome shotgun sequence (148527 bp)
Overview 1 RT 1: 11911-16927 bp Neighborhood of RT #1 [11911, 17097] MgrB PRK10238 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 11911-12087 bp Feature: domain Description: MgrB Location: 11992-12073 bp Feature: domain Description: MgrB Location: 11992 -12 073 bp Feature: gene Location: 12241-13623 bp Feature: domain Description: PRK10238 Location: 12253-13579 bp Feature: domain Description: PRK102 38 Location: 12 2 53-13579 bp Feature: gene Location: 13879-14817 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13981-14581 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13981-14581 bp Feature: gene Location: 14819-16444 bp Feature: domain Description: COG3950 Location: 15014-16358 bp Feature: domain Description: COG3950 Location: 15014-16358 bp Feature: gene Location: 16447-17097 bp Feature: domain Description: TIGR02646 Location: 16513-16927 bp Feature: domain Description: TIGR02 646 Location: 16513-1692 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MgrB (pfam13998), PRK10238 (aromatic amino acid transporter AroP), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: JAABMH010000038.1 Proteus sp. G2658 contig38, whole genome shotgun sequence (99332 bp)
Overview 1 RT 1: 64355-72468 bp Neighborhood of RT #1 [64355, 72479] uvrA PRK09010 RVT-GII Intron_maturas2 HNHc PRK11639 lexA Feature: gene Location: 64355-67249 bp Feature: domain Description: uvrA Location: 64418-67238 bp Feature: domain Description: uvrA Location: 64418-6723 8 bp Feature: gene Location: 67334-67966 bp Feature: domain Description: PRK09010 Location: 67445-67964 bp Feature: domain Description: PRK09010 Location: 67445-67964 bp Feature: gene Location: 68588-70492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68879-69713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68879-69713 bp Feature: domain Description: Intron_maturas2 Location: 69824-70226 bp Feature: domain Description: Intron_maturas2 Location: 69824-70226 bp Feature: domain Description: HNHc Note: nucleases Location: 70271-70433 bp Feature: domain Description: HNHc Note: nucleases Location: 70271-7043 3 bp Feature: gene Location: 70900-71430 bp Feature: domain Description: PRK11639 Location: 70906-71386 bp Feature: domain Description: PRK1163 9 Location: 70906-713 86 bp Feature: gene Location: 71868-72479 bp Feature: domain Description: lexA Location: 71871-72468 bp Feature: domain Description: lexA Location: 71871-72468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT uvrA (PRK00349), PRK09010 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK11639 (zinc uptake transcriptional repressor Zur), lexA (TIGR00498)

Seq: JAABMH010000074.1 Proteus sp. G2658 contig74, whole genome shotgun sequence (55331 bp)
Overview 1 RT 1: 15064-19370 bp Neighborhood of RT #1 [15064, 19370] Q RVT-Retrons Feature: gene Location: 15064-16092 bp Feature: domain Description: Q Location: 15073-16084 bp Feature: domain Description: Q Location: 15073-16084 bp Feature: gene Location: 16576-17700 bp Feature: gene Location: 17709-18668 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17844-18411 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1784 4 -184 11 bp Feature: gene Location: 18977-19213 bp Feature: gene Location: 19236-19370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons

Seq: JAABMH010000094.1 Proteus sp. G2658 contig94, whole genome shotgun sequence (8551 bp)
Overview 1 RT 1: 1315-5705 bp Neighborhood of RT #1 [1315, 5705] INT_Lambda_C PRK07006 RVT-Retrons HTH_ICLR Feature: gene Location: 1315-1587 bp Feature: domain Description: INT_Lambda_C Location: 1345-1570 bp Feature: domain Description: INT_Lambda_C Location: 1345 -15 70 bp Feature: gene Location: 1697-1870 bp Feature: domain Description: PRK07006 Location: 1706-1868 bp Feature: domain Description: PRK07006 Location: 1706-1868 bp Feature: gene Location: 2333-3475 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2555-3203 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25 5 5 -3203 bp Feature: gene Location: 3712-4941 bp Feature: domain Description: HTH_ICLR Location: 4720-4855 bp Feature: domain Description: HTH_ICLR Location: 4720-485 5 bp Feature: gene Location: 5064-5705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Lambda_C (cd00800), PRK07006 (isocitrate dehydrogenase; Reviewed), RVT-Retrons, HTH_ICLR (smart00346)