myRT

myRT report for GCA_009915585.1_ASM991558v1

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Seq: JAABMG010000012.1 Proteus sp. G2659 contig12, whole genome shotgun sequence (201886 bp)
Overview 1 RT 1: 166903-175015 bp Neighborhood of RT #1 [166903, 175026] uvrA PRK09010 RVT-GII Intron_maturas2 HNHc PRK11639 lexA Feature: gene Location: 166903-169797 bp Feature: domain Description: uvrA Location: 166966-169786 bp Feature: domain Description: uvrA Location: 1 66966-1 69786 bp Feature: gene Location: 169882-170514 bp Feature: domain Description: PRK09010 Location: 169993-170512 bp Feature: domain Description: PRK0901 0 Location: 1 69993-1 7051 2 bp Feature: gene Location: 171136-173040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171427-172261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 427-1 72261 bp Feature: domain Description: Intron_maturas2 Location: 172372-172774 bp Feature: domain Description: Intron_maturas2 Location: 1 72372-1 72774 bp Feature: domain Description: HNHc Note: nucleases Location: 172819-172981 bp Feature: domain Description: HNHc Note: nucleases Location: 1 7281 9-1 72981 bp Feature: gene Location: 173447-173977 bp Feature: domain Description: PRK11639 Location: 173453-173933 bp Feature: domain Description: PRK1 1 639 Location: 1 73453-1 73933 bp Feature: gene Location: 174415-175026 bp Feature: domain Description: lexA Location: 174418-175015 bp Feature: domain Description: lexA Location: 1 7441 8-1 7501 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT uvrA (PRK00349), PRK09010 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK11639 (zinc uptake transcriptional repressor Zur), lexA (TIGR00498)

Seq: JAABMG010000015.1 Proteus sp. G2659 contig15, whole genome shotgun sequence (106496 bp)
Overview 1 RT 1: 29741-34757 bp Neighborhood of RT #1 [29741, 34927] MgrB PRK10238 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 29741-29917 bp Feature: domain Description: MgrB Location: 29822-29903 bp Feature: domain Description: MgrB Location: 2 982 2 -2 9903 bp Feature: gene Location: 30071-31453 bp Feature: domain Description: PRK10238 Location: 30083-31409 bp Feature: domain Description: PRK102 38 Location: 30083-31409 bp Feature: gene Location: 31709-32647 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31811-32411 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31811-32 411 bp Feature: gene Location: 32649-34274 bp Feature: domain Description: COG3950 Location: 32844-34188 bp Feature: domain Description: COG3950 Location: 32 844-34188 bp Feature: gene Location: 34277-34927 bp Feature: domain Description: TIGR02646 Location: 34343-34757 bp Feature: domain Description: TIGR02 646 Location: 34343-34757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MgrB (pfam13998), PRK10238 (aromatic amino acid transporter AroP), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: JAABMG010000026.1 Proteus sp. G2659 contig26, whole genome shotgun sequence (233425 bp)
Overview 1 RT 1: 7900-11469 bp Neighborhood of RT #1 [7900, 11469] SmpB RVT-UG11 Feature: gene Location: 7900-8382 bp Feature: domain Description: SmpB Location: 7930-8377 bp Feature: domain Description: SmpB Location: 793 0-83 77 bp Feature: gene Location: 8972-9355 bp Feature: gene Location: 9380-10147 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 9515-9965 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 9515-9965 bp Feature: gene Location: 10996-11289 bp Feature: gene Location: 11326-11469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), RVT-UG11

Seq: JAABMG010000042.1 Proteus sp. G2659 contig42, whole genome shotgun sequence (13756 bp)
Overview 1 RT 1: 1623-7498 bp Neighborhood of RT #1 [1623, 7498] INT_Lambda_C PRK07006 RVT-UG8 RVT-UG3 Feature: gene Location: 1623-1895 bp Feature: domain Description: INT_Lambda_C Location: 1653-1878 bp Feature: domain Description: INT_Lambda_C Location: 1653-1878 bp Feature: gene Location: 2005-2178 bp Feature: domain Description: PRK07006 Location: 2014-2176 bp Feature: domain Description: PRK07006 Location: 2014 -2176 bp Feature: gene Location: 2903-4915 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3479-3929 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 34 79-3929 bp Feature: gene Location: 4906-6177 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5194-5686 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5194 -5686 bp Feature: gene Location: 6361-7002 bp Feature: gene Location: 7247-7498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Lambda_C (cd00800), PRK07006 (isocitrate dehydrogenase; Reviewed), RVT-UG8, RVT-UG3