myRT

myRT report for GCA_009917605.1_ASM991760v1

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Seq: QZEG01000201.1 Anaerotruncus sp. 1XD42-93 Scaffold202_1, whole genome shotgun sequence (825 bp)
Overview 1 RT 1: 1-826 bp Neighborhood of RT #1 [1, 825] RVT-GII Feature: gene Location: 1-825 bp Ori: NBK20340.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139-826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39-826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QZEG01000135.1 Anaerotruncus sp. 1XD42-93 Scaffold135_1, whole genome shotgun sequence (2615 bp)
Overview 1 RT 1: 125-1898 bp Neighborhood of RT #1 [125, 1918] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 125-1918 bp Ori: NBK20215.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392-1208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392 -12 08 bp Feature: domain Description: Intron_maturas2 Location: 1286-1577 bp Feature: domain Description: Intron_maturas2 Location: 12 86-1577 bp Feature: domain Description: HNHc Note: nucleases Location: 1745-1898 bp Feature: domain Description: HNHc Note: nucleases Location: 1745-1898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: QZEG01000032.1 Anaerotruncus sp. 1XD42-93 Scaffold32_1, whole genome shotgun sequence (33622 bp)
Overview 1 RT 1: 25005-29198 bp Neighborhood of RT #1 [25005, 29257] Tn916-Xis FtsK RVT-GII GIIM TnaA TnaA Feature: gene Location: 25005-25223 bp Ori: NBK19100.1 Feature: domain Description: Tn916-Xis Location: 25032-25221 bp Feature: domain Description: Tn916-Xis Location: 2503 2-25221 bp Feature: gene Location: 25454-26350 bp Ori: NBK19101.1 Feature: domain Description: FtsK Location: 25892-26324 bp Feature: domain Description: FtsK Location: 25892-263 24 bp Feature: gene Location: 26328-27014 bp Ori: NBK19102.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26331-26469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263 3 1-26469 bp Feature: domain Description: GIIM Note: maturase Location: 26523-26754 bp Feature: domain Description: GIIM Note: maturase Location: 26523 -26754 bp Feature: gene Location: 27433-28008 bp Feature: domain Description: TnaA Location: 27436-27976 bp Feature: domain Description: TnaA Location: 2743 6-27976 bp Feature: gene Location: 28160-29257 bp Feature: domain Description: TnaA Location: 28181-29198 bp Feature: domain Description: TnaA Location: 28181-29198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tn916-Xis (pfam09035), FtsK (COG1674), RVT-GII, GIIM (pfam08388), TnaA (COG3033)

Seq: QZEG01000012.1 Anaerotruncus sp. 1XD42-93 Scaffold12_1, whole genome shotgun sequence (74417 bp)
Overview 1 RT 1: 57997-60576 bp Neighborhood of RT #1 [57997, 60587] Phage_XkdX RVT-DGRs SH3_and_anchor Phage_holin_Dp1 Feature: gene Location: 57997-58137 bp Ori: NBK18204.1 Feature: domain Description: Phage_XkdX Location: 58018-58135 bp Feature: domain Description: Phage_XkdX Location: 58018-58135 bp Feature: gene Location: 58137-58628 bp Feature: gene Location: 58831-60027 bp Ori: NBK18206.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 59026-59749 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 59026-5974 9 bp Feature: gene Location: 60034-60366 bp Ori: NBK18207.1 Feature: domain Description: SH3_and_anchor Location: 60067-60352 bp Feature: domain Description: SH3_and_anchor Location: 60067-60352 bp Feature: gene Location: 60381-60587 bp Ori: NBK18208.1 Feature: domain Description: Phage_holin_Dp1 Location: 60390-60576 bp Feature: domain Description: Phage_holin_Dp1 Location: 60390-60576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs, SH3_and_anchor (TIGR04211), Phage_holin_Dp1 (pfam16938)