myRT

myRT report for GCA_009917695.1_ASM991769v1

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Seq: JAACJG010000008.1 Candidatus Rifleibacterium amylolyticum isolate CH46 Scaffold07, whole genome shotgun sequence (395364 bp)
Overview 1 RT 1: 354673-357911 bp Neighborhood of RT #1 [354673, 357982] RVT-GII GIIM TIGR00149_YjbQ_YjbQ_YjbQ 23S_rRNA_IVP Feature: gene Location: 354673-354813 bp Feature: gene Location: 354961-355080 bp Feature: gene Location: 355186-356577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 355573-356233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 355573-356233 bp Feature: domain Description: GIIM Note: maturase Location: 356311-356527 bp Feature: domain Description: GIIM Note: maturase Location: 35631 1 -356527 bp Feature: gene Location: 357092-357493 bp Feature: domain Description: TIGR00149_YjbQ_YjbQ_YjbQ Location: 357110-357482 bp Feature: domain Description: TIGR001 49_YjbQ_YjbQ_YjbQ Location: 3571 1 0-357482 bp Feature: gene Location: 357584-357982 bp Feature: domain Description: 23S_rRNA_IVP Location: 357602-357911 bp Feature: domain Description: 23S_rRNA_IVP Location: 357602-35791 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TIGR00149_YjbQ_YjbQ_YjbQ, 23S_rRNA_IVP (pfam05635)

Seq: JAACJG010000004.1 Candidatus Rifleibacterium amylolyticum isolate CH46 Scaffold03, whole genome shotgun sequence (533939 bp)
Overview 1 RT 1: 510411-513392 bp Neighborhood of RT #1 [510411, 513424] PIN_VapC4-5_FitB-like PIN_VapC4-5_FitB-like RVT-GII ParE_toxin Unstab_antitox Feature: gene Location: 510411-510653 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 510429-510519 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 51042 9-510519 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 510522-510630 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 51052 2 -510630 bp Feature: gene Location: 510643-510870 bp Feature: gene Location: 511389-512549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511665-512280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511665-512 2 80 bp Feature: gene Location: 512853-513194 bp Feature: domain Description: ParE_toxin Location: 512865-513117 bp Feature: domain Description: ParE_toxin Location: 512 865-513117 bp Feature: gene Location: 513191-513424 bp Feature: domain Description: Unstab_antitox Location: 513233-513392 bp Feature: domain Description: Unstab_antitox Location: 5132 33-513392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_VapC4-5_FitB-like (cd18754), RVT-GII, ParE_toxin (pfam05016), Unstab_antitox (pfam09720)

Seq: JAACJG010000001.1 Candidatus Rifleibacterium amylolyticum isolate CH46 Scaffold00, whole genome shotgun sequence (590006 bp)
Overview 1 RT 1: 186322-192855 bp Neighborhood of RT #1 [186322, 192866] Rnd Propeptide_C25 Peptidase_C25_N_gingipain BID_1 RVT-GII PgpA pgsA Feature: gene Location: 186322-187542 bp Feature: domain Description: Rnd Location: 186376-187486 bp Feature: domain Description: Rnd Location: 1863 76-187486 bp Feature: gene Location: 187747-189693 bp Feature: domain Description: Propeptide_C25 Location: 187882-188407 bp Feature: domain Description: Propeptide_C25 Location: 187882-188407 bp Feature: domain Description: Peptidase_C25_N_gingipain Location: 188428-189415 bp Feature: domain Description: Peptidase_C25_N_gingipain Location: 188428-189415 bp Feature: domain Description: BID_1 Location: 189469-189646 bp Feature: domain Description: BID_1 Location: 189469-189646 bp Feature: gene Location: 190180-191175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190516-191134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190516-19113 4 bp Feature: gene Location: 191792-192295 bp Feature: domain Description: PgpA Location: 191858-192275 bp Feature: domain Description: PgpA Location: 191858-192275 bp Feature: gene Location: 192258-192866 bp Feature: domain Description: pgsA Location: 192261-192855 bp Feature: domain Description: pgsA Location: 192261-192855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rnd (COG0349), Propeptide_C25 (pfam08126), Peptidase_C25_N_gingipain (cd10913), BID_1 (smart00634), RVT-GII, PgpA (pfam04608), pgsA (TIGR00560)