myRT

myRT report for GCA_009921595.1_ASM992159v1

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Seq: RFXO01000099.1 Alphaproteobacteria bacterium isolate WB5_2B_252 contig_100_98, whole genome shotgun sequence (5139 bp)
Overview 1 RT 1: 2534-5138 bp Neighborhood of RT #1 [2534, 5139] PCuAC PCuAC RVT-UNC GIIM LD-carboxypeptidase Feature: gene Location: 2534-3118 bp Ori: NBT85929.1 Feature: domain Description: PCuAC Location: 2654-2735 bp Feature: domain Description: PCuAC Location: 2654-2735 bp Feature: domain Description: PCuAC Location: 2807-3059 bp Feature: domain Description: PCuAC Location: 2807-3059 bp Feature: gene Location: 3834-4076 bp Feature: gene Location: 4267-4842 bp Ori: NBT85931.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 4303-4447 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 4303-4447 bp Feature: domain Description: GIIM Note: maturase Location: 4531-4747 bp Feature: domain Description: GIIM Note: maturase Location: 4531 -4747 bp Feature: gene Location: 4787-5139 bp Ori: NBT85932.1 Feature: domain Description: LD-carboxypeptidase Location: 4994-5138 bp Feature: domain Description: LD-carboxypeptidase Location: 4994-51 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PCuAC (pfam04314), RVT-CRISPR/RVT-GII/RVT-UG28b(RVT-UNC), GIIM (pfam08388), LD-carboxypeptidase (cd14852)

Seq: RFXO01000297.1 Alphaproteobacteria bacterium isolate WB5_2B_252 contig_100_296, whole genome shotgun sequence (1380 bp)
Overview 1 RT 1: 259-1003 bp Neighborhood of RT #1 [259, 1335] RVT-UG4 Feature: gene Location: 259-1335 bp Ori: NBT86487.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 562-1003 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 562 -1003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: RFXO01000367.1 Alphaproteobacteria bacterium isolate WB5_2B_252 contig_100_366, whole genome shotgun sequence (1140 bp)
Overview 1 RT 1: 217-910 bp Neighborhood of RT #1 [217, 1140] RVT-GII Feature: gene Location: 217-1140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826-910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826-910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RFXO01000201.1 Alphaproteobacteria bacterium isolate WB5_2B_252 contig_100_200, whole genome shotgun sequence (2220 bp)
Overview 1 RT 1: 1-2216 bp Neighborhood of RT #1 [1, 2220] RVT-GII GIIM DDE_Tnp_1_3 Feature: gene Location: 1-443 bp Feature: gene Location: 700-2028 bp Ori: NBT86277.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982-1636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982-1636 bp Feature: domain Description: GIIM Note: maturase Location: 1717-1936 bp Feature: domain Description: GIIM Note: maturase Location: 1717-1936 bp Feature: gene Location: 2114-2220 bp Ori: NBT86278.1 Feature: domain Description: DDE_Tnp_1_3 Location: 2117-2216 bp Feature: domain Description: DDE_Tnp_1_3 Location: 2117-2216 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_3 (pfam13612)

Seq: RFXO01000187.1 Alphaproteobacteria bacterium isolate WB5_2B_252 contig_100_186, whole genome shotgun sequence (2519 bp)
Overview 1 RT 1: 47-1689 bp Neighborhood of RT #1 [47, 1910] DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 47-610 bp Ori: NBT86248.1 Feature: domain Description: DDE_Tnp_1 Location: 116-590 bp Feature: domain Description: DDE_Tnp_1 Location: 116-5 90 bp Feature: gene Location: 627-1910 bp Ori: NBT86249.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 819-1437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 819-1437 bp Feature: domain Description: GIIM Note: maturase Location: 1482-1689 bp Feature: domain Description: GIIM Note: maturase Location: 1482-1689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: RFXO01000271.1 Alphaproteobacteria bacterium isolate WB5_2B_252 contig_100_270, whole genome shotgun sequence (1531 bp)
Overview 1 RT 1: 172-1387 bp Neighborhood of RT #1 [172, 1476] RVT-GII GIIM Feature: gene Location: 172-1476 bp Ori: NBT86439.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457-1096 bp Feature: domain Description: GIIM Note: maturase Location: 1168-1387 bp Feature: domain Description: GIIM Note: maturase Location: 116 8-1387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)