myRT

myRT report for GCA_009925295.1_ASM992529v1

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Seq: WHZC01000004.1 Klebsiella pneumoniae strain 113CSB-F-B NODE_4_length_271455_cov_211.754416, whole genome shotgun sequence (271455 bp)
Overview 1 RT 1: 37762-41701 bp Neighborhood of RT #1 [37762, 41909] Psu RVT-UG17 SLATT_5 PRK09692 PRK09692 Feature: gene Location: 37762-38311 bp Feature: domain Description: Psu Location: 37780-38161 bp Feature: domain Description: Psu Location: 37780-381 61 bp Feature: gene Location: 38321-38456 bp Feature: gene Location: 38638-40047 bp Ori: NBZ24085.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 38875-39487 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 38875-39487 bp Feature: gene Location: 40146-40883 bp Ori: NBZ24086.1 Feature: domain Description: SLATT_5 Location: 40245-40848 bp Feature: domain Description: SLATT_5 Location: 40245-40848 bp Feature: gene Location: 40936-41909 bp Feature: domain Description: PRK09692 Location: 40945-41308 bp Feature: domain Description: PRK09692 Location: 40945-41 308 bp Feature: domain Description: PRK09692 Location: 41329-41701 bp Feature: domain Description: PRK09692 Location: 41 329-41 701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG17, SLATT_5 (pfam18160), PRK09692 (Integrase; provisional)

Seq: WHZC01000064.1 Klebsiella pneumoniae strain 113CSB-F-B NODE_64_length_1085_cov_513.592262, whole genome shotgun sequence (1085 bp)
Overview 1 RT 1: 1-1085 bp Neighborhood of RT #1 [1, 1085] RVT-GII Feature: gene Location: 1-767 bp Ori: NBZ28241.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-763 bp Feature: gene Location: 900-1085 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WHZC01000067.1 Klebsiella pneumoniae strain 113CSB-F-B NODE_67_length_811_cov_563.247956, whole genome shotgun sequence (811 bp)
Overview 1 RT 1: 1-358 bp Neighborhood of RT #1 [1, 750] RVT-GII Feature: gene Location: 1-750 bp Ori: NBZ28244.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-3 58 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WHZC01000021.1 Klebsiella pneumoniae strain 113CSB-F-B NODE_21_length_97030_cov_180.855559, whole genome shotgun sequence (97030 bp)
Overview 1 RT 1: 28459-32614 bp Neighborhood of RT #1 [28459, 32778] RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 28459-28548 bp Feature: gene Location: 28550-29191 bp Feature: gene Location: 29617-30582 bp Ori: NBZ27078.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29725-30322 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29725-30322 bp Feature: gene Location: 30560-32152 bp Ori: NBZ27079.1 Feature: domain Description: COG3950 Location: 30740-31961 bp Feature: domain Description: COG3950 Location: 3074 0-31961 bp Feature: gene Location: 32137-32778 bp Ori: NBZ27080.1 Feature: domain Description: TIGR02646 Location: 32239-32614 bp Feature: domain Description: TIGR0264 6 Location: 32239-32614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)