myRT

myRT report for GCA_009928415.1_ASM992841v1

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Seq: JAABNN010000013.1 Bacillus sp. USDA818B3_A NODE_13_length_123988_cov_96.776242, whole genome shotgun sequence (123988 bp)
Overview 1 RT 1: 68294-78378 bp Neighborhood of RT #1 [68294, 78383] addB_Gpos addA_Gpos RVT-GII Intron_maturas2 HNHc addA_Gpos gerPA Feature: gene Location: 68294-71788 bp Feature: domain Description: addB_Gpos Location: 68297-71783 bp Feature: domain Description: addB_Gpos Location: 68297-71 783 bp Feature: gene Location: 71781-73136 bp Feature: domain Description: addA_Gpos Location: 71823-73125 bp Feature: domain Description: addA_Gpos Location: 71 823-731 25 bp Feature: gene Location: 73756-75564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74020-74845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74020-74845 bp Feature: domain Description: Intron_maturas2 Location: 74920-75256 bp Feature: domain Description: Intron_maturas2 Location: 74920-75256 bp Feature: domain Description: HNHc Note: nucleases Location: 75382-75535 bp Feature: domain Description: HNHc Note: nucleases Location: 75382-75535 bp Feature: gene Location: 75827-78100 bp Feature: domain Description: addA_Gpos Location: 75830-78095 bp Feature: domain Description: addA_Gpos Location: 75830-78095 bp Feature: gene Location: 78165-78383 bp Feature: domain Description: gerPA Location: 78168-78378 bp Feature: domain Description: gerPA Location: 781 68-78378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT addB_Gpos (TIGR02773), addA_Gpos (TIGR02785), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), gerPA (pfam10676)

Seq: JAABNN010000061.1 Bacillus sp. USDA818B3_A NODE_162_length_568_cov_225.329435, whole genome shotgun sequence (568 bp)
Overview 1 RT 1: 1-559 bp Neighborhood of RT #1 [1, 567] RVT-GII Feature: gene Location: 1-567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAABNN010000017.1 Bacillus sp. USDA818B3_A NODE_17_length_114252_cov_110.957346, whole genome shotgun sequence (114252 bp)
Overview 1 RT 1: 46392-50473 bp Neighborhood of RT #1 [46392, 50475] PRK06770 RVT-GII PBP1_ABC_sugar_binding_like YesM Feature: gene Location: 46392-46535 bp Feature: gene Location: 46771-47280 bp Feature: domain Description: PRK06770 Location: 46780-47275 bp Feature: domain Description: PRK06770 Location: 46780-47275 bp Feature: gene Location: 47440-47595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47443-47548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47443 -47548 bp Feature: gene Location: 47664-48668 bp Feature: domain Description: PBP1_ABC_sugar_binding_like Location: 47799-48561 bp Feature: domain Description: PBP1_ABC_sugar_binding_like Location: 47799-48561 bp Feature: gene Location: 48688-50475 bp Feature: domain Description: YesM Location: 48976-50473 bp Feature: domain Description: YesM Location: 48976-50473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06770 (hypothetical protein; Provisional), RVT-GII, PBP1_ABC_sugar_binding_like, YesM (COG2972)

Seq: JAABNN010000001.1 Bacillus sp. USDA818B3_A NODE_1_length_717443_cov_88.261741, whole genome shotgun sequence (717443 bp)
Overview 1 RT 1: 324336-328634 bp Neighborhood of RT #1 [324336, 328642] citMHS RVT-GII GIIM GIIM CitB Feature: gene Location: 324336-325628 bp Feature: domain Description: citMHS Location: 324339-325626 bp Feature: domain Description: citMHS Location: 324 339-325626 bp Feature: gene Location: 325848-326078 bp Feature: gene Location: 326069-327289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326297-326921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326297-326921 bp Feature: domain Description: GIIM Note: maturase Location: 326996-327104 bp Feature: domain Description: GIIM Note: maturase Location: 326996-327104 bp Feature: domain Description: GIIM Note: maturase Location: 327194-327284 bp Feature: domain Description: GIIM Note: maturase Location: 327194 -327284 bp Feature: gene Location: 327585-327743 bp Feature: gene Location: 327959-328642 bp Feature: domain Description: CitB Location: 327971-328634 bp Feature: domain Description: CitB Location: 327971-328634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT citMHS (TIGR00784), RVT-GII, GIIM (pfam08388), CitB (TIGR02484)

Seq: JAABNN010000002.1 Bacillus sp. USDA818B3_A NODE_2_length_687907_cov_97.122250, whole genome shotgun sequence (687907 bp)
Overview 1 RT 1: 2544-8929 bp Neighborhood of RT #1 [2544, 9897] DHAK_reg RVT-UNC PinE CoiA Feature: gene Location: 2544-3113 bp Feature: domain Description: DHAK_reg Location: 2586-2862 bp Feature: domain Description: DHAK_reg Location: 25 86-2862 bp Feature: gene Location: 3474-3617 bp Feature: gene Location: 4295-7717 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 4565-5195 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 45 65 -5 195 bp Feature: gene Location: 7957-8373 bp Feature: domain Description: PinE Location: 7984-8356 bp Feature: domain Description: PinE Location: 7984-835 6 bp Feature: gene Location: 8455-9897 bp Feature: domain Description: CoiA Location: 8527-8929 bp Feature: domain Description: CoiA Location: 85 27-8929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DHAK_reg (TIGR02366), RVT-UG25/RVT-UG19/RVT-GII/RVT-CRISPR(RVT-UNC), PinE (COG1961), CoiA (pfam06054)

Seq: JAABNN010000003.1 Bacillus sp. USDA818B3_A NODE_3_length_681114_cov_93.266021, whole genome shotgun sequence (681114 bp)
Overview 1 RT 1: 596598-602536 bp Neighborhood of RT #1 [596598, 602547] PRK13922 PRK13927 RVT-GII Intron_maturas2 HNHc RadC Maf Feature: gene Location: 596598-597473 bp Feature: domain Description: PRK13922 Location: 596601-597423 bp Feature: domain Description: PRK13922 Location: 596 6 01-597423 bp Feature: gene Location: 597531-598553 bp Feature: domain Description: PRK13927 Location: 597546-598536 bp Feature: domain Description: PRK13927 Location: 597546 -598536 bp Feature: gene Location: 598966-600828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 599236-600076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 599236 -6 00076 bp Feature: domain Description: Intron_maturas2 Location: 600232-600439 bp Feature: domain Description: Intron_maturas2 Location: 6 00232-6 00439 bp Feature: domain Description: HNHc Note: nucleases Location: 600634-600724 bp Feature: domain Description: HNHc Note: nucleases Location: 6 006 34-6 00724 bp Feature: gene Location: 601382-601942 bp Feature: domain Description: RadC Location: 601406-601931 bp Feature: domain Description: RadC Location: 6 01406 -6 01931 bp Feature: gene Location: 601975-602547 bp Feature: domain Description: Maf Location: 601978-602536 bp Feature: domain Description: Maf Location: 6 01978-6 02536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RadC (pfam04002), Maf (pfam02545)

Seq: JAABNN010000049.1 Bacillus sp. USDA818B3_A NODE_55_length_1970_cov_1002.878329, whole genome shotgun sequence (1970 bp)
Overview 1 RT 1: 136-1968 bp Neighborhood of RT #1 [136, 1968] RVT-GII GIIM Feature: gene Location: 136-1422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430-1060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430-1060 bp Feature: domain Description: GIIM Note: maturase Location: 1141-1369 bp Feature: domain Description: GIIM Note: maturase Location: 1141-1369 bp Feature: gene Location: 1434-1571 bp Feature: gene Location: 1771-1968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAABNN010000050.1 Bacillus sp. USDA818B3_A NODE_56_length_1944_cov_273.385389, whole genome shotgun sequence (1944 bp)
Overview 1 RT 1: 106-1348 bp Neighborhood of RT #1 [106, 1434] RVT-GII GIIM Feature: gene Location: 106-1434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361-1054 bp Feature: domain Description: GIIM Note: maturase Location: 1135-1348 bp Feature: domain Description: GIIM Note: maturase Location: 1135-1348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAABNN010000006.1 Bacillus sp. USDA818B3_A NODE_6_length_270360_cov_73.622175, whole genome shotgun sequence (270360 bp)
Overview 1 RT 1: 262384-267527 bp Neighborhood of RT #1 [262384, 267559] YafY DUF3986 RVT-GII HNHc Acetyltransf_10 Feature: gene Location: 262384-263346 bp Feature: domain Description: YafY Location: 262393-263329 bp Feature: domain Description: YafY Location: 26239 3-263329 bp Feature: gene Location: 263772-264047 bp Feature: domain Description: DUF3986 Location: 263787-264030 bp Feature: domain Description: DUF39 86 Location: 263787-264030 bp Feature: gene Location: 264233-266032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264530-265223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264530-265223 bp Feature: domain Description: HNHc Note: nucleases Location: 265784-265919 bp Feature: domain Description: HNHc Note: nucleases Location: 265784-2659 19 bp Feature: gene Location: 266778-266912 bp Feature: gene Location: 267125-267559 bp Feature: domain Description: Acetyltransf_10 Location: 267254-267527 bp Feature: domain Description: Acetyltransf_10 Location: 267254-267527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YafY (COG2378), DUF3986 (pfam13143), RVT-GII, HNHc (smart00507), Acetyltransf_10 (pfam13673)

Seq: JAABNN010000008.1 Bacillus sp. USDA818B3_A NODE_8_length_155713_cov_105.719198, whole genome shotgun sequence (155713 bp)
Overview 1 RT 1: 2-3188 bp Neighborhood of RT #1 [2, 3188] RVT-GII thrS Feature: gene Location: 2-304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 242-305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 242-305 bp Feature: gene Location: 971-2959 bp Feature: domain Description: thrS Location: 1040-2951 bp Feature: domain Description: thrS Location: 10 40-2951 bp Feature: gene Location: 3051-3188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, thrS (TIGR00418)