myRT

myRT report for GCA_009928615.1_ASM992861v1

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Seq: PDFG01000034.1 Klebsiella pneumoniae strain KN-ST258 NODE_16_length_116465_cov_44.8317_ID_31, whole genome shotgun sequence (116465 bp)
Overview 1 RT 1: 77513-84900 bp Neighborhood of RT #1 [77513, 84950] DDE_Tnp_1_5 FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 77513-78436 bp Ori: NCA48126.1 Feature: domain Description: DDE_Tnp_1_5 Location: 77570-77903 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 77570-77903 bp Feature: gene Location: 78516-80957 bp Feature: domain Description: FimD Location: 78519-80946 bp Feature: domain Description: FimD Location: 7851 9-80946 bp Feature: gene Location: 80954-83035 bp Ori: NCA48127.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 81365-81809 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 81 365-81 809 bp Feature: gene Location: 83026-83485 bp Feature: domain Description: Integrase_1 Location: 83047-83314 bp Feature: domain Description: Integrase_1 Location: 83047-8331 4 bp Feature: gene Location: 83712-84950 bp Feature: domain Description: PRK09692 Location: 83718-84900 bp Feature: domain Description: PRK09692 Location: 8371 8-84900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_5 (pfam13737), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)

Seq: PDFG01000031.1 Klebsiella pneumoniae strain KN-ST258 NODE_20_length_80940_cov_45.3407_ID_39, whole genome shotgun sequence (80940 bp)
Overview 1 RT 1: 62985-67411 bp Neighborhood of RT #1 [62985, 67413] PHA02517 RVT-GII GIIM PHA02517 PFDH_like Feature: gene Location: 62985-63326 bp Feature: domain Description: PHA02517 Location: 62991-63327 bp Feature: domain Description: PHA02 517 Location: 62 991-6332 7 bp Feature: gene Location: 63295-63717 bp Feature: gene Location: 63980-65503 bp Ori: NCA47804.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64253-64985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 642 53-64985 bp Feature: domain Description: GIIM Note: maturase Location: 65063-65258 bp Feature: domain Description: GIIM Note: maturase Location: 65063-652 58 bp Feature: gene Location: 65584-66047 bp Feature: domain Description: PHA02517 Location: 65587-65836 bp Feature: domain Description: PHA02 517 Location: 65587-65836 bp Feature: gene Location: 66280-67413 bp Ori: NCA47805.1 Feature: domain Description: PFDH_like Location: 66283-67411 bp Feature: domain Description: PFDH_like Location: 662 83-67411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PFDH_like (cd08282)