myRT

myRT report for GCA_009928955.1_ASM992895v1

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Seq: SABN01000159.1 Opitutae bacterium isolate INTA.CYC.094 contig-100_15945, whole genome shotgun sequence (5005 bp)
Overview 1 RT 1: 49-3538 bp Neighborhood of RT #1 [49, 3543] YfmG RVT-DGRs HRDC YfmG Feature: gene Location: 49-453 bp Feature: gene Location: 807-923 bp Feature: domain Description: YfmG Location: 810-921 bp Feature: domain Description: YfmG Location: 81 0-921 bp Feature: gene Location: 977-1975 bp Ori: NCA83575.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1184-1784 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 84-1 784 bp Feature: gene Location: 1836-2429 bp Ori: NCA83576.1 Feature: domain Description: HRDC Location: 2082-2277 bp Feature: domain Description: HRDC Location: 2082-2277 bp Feature: gene Location: 2716-3543 bp Ori: NCA83577.1 Feature: domain Description: YfmG Location: 2821-3538 bp Feature: domain Description: YfmG Location: 2821 -3538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, HRDC (smart00341)

Seq: SABN01000022.1 Opitutae bacterium isolate INTA.CYC.094 contig-100_747, whole genome shotgun sequence (38407 bp)
Overview 1 RT 1: 29558-35893 bp Neighborhood of RT #1 [29558, 35913] YfmG RVT-DGRs HRDC Big_5 Ig_2 pfam03781 Feature: gene Location: 29558-29791 bp Feature: gene Location: 31065-31280 bp Ori: NCA82002.1 Feature: domain Description: YfmG Location: 31104-31230 bp Feature: domain Description: YfmG Location: 31104-312 30 bp Feature: gene Location: 31291-32295 bp Ori: NCA82003.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31498-32092 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31498-32 092 bp Feature: gene Location: 32292-32849 bp Ori: NCA82004.1 Feature: domain Description: HRDC Location: 32541-32739 bp Feature: domain Description: HRDC Location: 32 541-32 739 bp Feature: gene Location: 33124-35913 bp Ori: NCA82005.1 Feature: domain Description: Big_5 Location: 33406-33697 bp Feature: domain Description: Big_5 Location: 33406-33697 bp Feature: domain Description: Ig_2 Location: 34897-35110 bp Feature: domain Description: Ig_2 Location: 34897-35110 bp Feature: domain Description: pfam03781 Location: 35143-35893 bp Feature: domain Description: pfam03781 Location: 35143-35893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, HRDC (smart00341), Big_5 (pfam13205), Ig_2 (pfam13895), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: SABN01000208.1 Opitutae bacterium isolate INTA.CYC.094 contig-100_44518, whole genome shotgun sequence (2376 bp)
Overview 1 RT 1: 65-1938 bp Neighborhood of RT #1 [65, 1997] RVT-GII GIIM INT_C_like_1 Feature: gene Location: 65-838 bp Ori: NCA83718.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68-290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68-290 bp Feature: domain Description: GIIM Note: maturase Location: 344-545 bp Feature: domain Description: GIIM Note: maturase Location: 3 44-545 bp Feature: gene Location: 927-1595 bp Feature: gene Location: 1605-1997 bp Ori: NCA83720.1 Feature: domain Description: INT_C_like_1 Location: 1776-1938 bp Feature: domain Description: INT_C_like_1 Location: 1776-193 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), INT_C_like_1 (cd01184)