myRT

myRT report for GCA_009929165.1_ASM992916v1

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Seq: SABD01000372.1 Bacteroidia bacterium isolate INTA.CYC.074 contig-100_29857, whole genome shotgun sequence (3173 bp)
Overview 1 RT 1: 1-3073 bp Neighborhood of RT #1 [1, 3073] DNA_methylase RVT-GII HNHc Feature: gene Location: 1-369 bp Ori: NCB27009.1 Feature: domain Description: DNA_methylase Location: 13-352 bp Feature: domain Description: DNA_methylase Location: 1 3-352 bp Feature: gene Location: 1044-2927 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371-2115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 371 -21 1 5 bp Feature: domain Description: HNHc Note: nucleases Location: 2676-2793 bp Feature: domain Description: HNHc Note: nucleases Location: 2676-2793 bp Feature: gene Location: 2987-3073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_methylase (pfam00145), RVT-GII, HNHc (smart00507)

Seq: SABD01000399.1 Bacteroidia bacterium isolate INTA.CYC.074 contig-100_34802, whole genome shotgun sequence (2840 bp)
Overview 1 RT 1: 1-2692 bp Neighborhood of RT #1 [1, 2736] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 1-2399 bp Ori: NCB27092.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 967-1570 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 967-1570 bp Feature: domain Description: Cas1_I-II-III Location: 1651-2395 bp Feature: domain Description: Cas1_I-II-III Location: 1651-2 395 bp Feature: gene Location: 2434-2736 bp Ori: NCB27093.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 2473-2692 bp Feature: domain Description: Cas2 _I_II_III Location: 2 473-2 692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: SABD01000485.1 Bacteroidia bacterium isolate INTA.CYC.074 contig-100_44990, whole genome shotgun sequence (2357 bp)
Overview 1 RT 1: 687-2342 bp Neighborhood of RT #1 [687, 2342] RVT-DGRs Feature: gene Location: 687-920 bp Feature: gene Location: 962-2020 bp Ori: NCB27335.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1181-1772 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1181-1772 bp Feature: gene Location: 1980-2342 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: SABD01000705.1 Bacteroidia bacterium isolate INTA.CYC.074 contig-100_86089, whole genome shotgun sequence (1476 bp)
Overview 1 RT 1: 1-1476 bp Neighborhood of RT #1 [1, 1476] RVT-GII Feature: gene Location: 1-131 bp Feature: gene Location: 591-1476 bp Ori: NCB27755.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 870-1476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 870-14 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SABD01000672.1 Bacteroidia bacterium isolate INTA.CYC.074 contig-100_79894, whole genome shotgun sequence (1557 bp)
Overview 1 RT 1: 1-1154 bp Neighborhood of RT #1 [1, 1171] RVT-DGRs Avd_like Feature: gene Location: 1-616 bp Ori: NCB27702.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 184-469 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 184-469 bp Feature: gene Location: 821-1171 bp Ori: NCB27703.1 Feature: domain Description: Avd_like Location: 842-1154 bp Feature: domain Description: Avd_like Location: 842-115 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)