myRT

myRT report for GCA_009929835.1_ASM992983v1

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Seq: RZZQ01000173.1 Chloroflexia bacterium isolate INTA.AUR.084 contig-100_11642, whole genome shotgun sequence (4240 bp)
Overview 1 RT 1: 2520-4046 bp Neighborhood of RT #1 [2520, 4240] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR Feature: gene Location: 2520-2795 bp Ori: NCC31296.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 2532-2757 bp Feature: domain Description: Cas2_I_II_III Location: 2532-2757 bp Feature: gene Location: 2805-3797 bp Ori: NCC31297.1 Gene: cas1 Feature: domain Description: Cas1_I-II-III Location: 2814-3762 bp Feature: domain Description: Cas1 _I-II-III Location: 281 4-3762 bp Feature: gene Location: 3800-4240 bp Ori: NCC31298.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3806-4046 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3806-4046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR

Seq: RZZQ01001226.1 Chloroflexia bacterium isolate INTA.AUR.084 contig-100_36197, whole genome shotgun sequence (1951 bp)
Overview 1 RT 1: 1-1899 bp Neighborhood of RT #1 [1, 1899] DDE_Tnp_IS66 RVT-GII GIIM Feature: gene Location: 1-135 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4-133 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4-133 bp Feature: gene Location: 216-1457 bp Ori: NCC33932.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420-1074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 0-1074 bp Feature: domain Description: GIIM Note: maturase Location: 1155-1377 bp Feature: domain Description: GIIM Note: maturase Location: 1155-1377 bp Feature: gene Location: 1567-1899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)

Seq: RZZQ01001554.1 Chloroflexia bacterium isolate INTA.AUR.084 contig-100_42910, whole genome shotgun sequence (1732 bp)
Overview 1 RT 1: 1-1594 bp Neighborhood of RT #1 [1, 1659] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-1659 bp Ori: NCC34535.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82-877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82-877 bp Feature: domain Description: Intron_maturas2 Location: 1012-1228 bp Feature: domain Description: Intron_maturas2 Location: 1012-1228 bp Feature: domain Description: HNHc Note: nucleases Location: 1420-1594 bp Feature: domain Description: HNHc Note: nucleases Location: 1420-1594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: RZZQ01002008.1 Chloroflexia bacterium isolate INTA.AUR.084 contig-100_52375, whole genome shotgun sequence (1507 bp)
Overview 1 RT 1: 54-1324 bp Neighborhood of RT #1 [54, 1324] RVT-DGRs Feature: gene Location: 54-1055 bp Ori: NCC35268.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 258-849 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 258-84 9 bp Feature: gene Location: 1052-1324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: RZZQ01002822.1 Chloroflexia bacterium isolate INTA.AUR.084 contig-100_70219, whole genome shotgun sequence (1218 bp)
Overview 1 RT 1: 1-1164 bp Neighborhood of RT #1 [1, 1175] RVT-DGRs YfmG Feature: gene Location: 1-716 bp Ori: NCC36538.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 211-712 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 211-712 bp Feature: gene Location: 873-1175 bp Ori: NCC36539.1 Feature: domain Description: YfmG Location: 879-1164 bp Feature: domain Description: YfmG Location: 879-1164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, YfmG (COG1262)

Seq: RZZQ01000396.1 Chloroflexia bacterium isolate INTA.AUR.084 contig-100_17774, whole genome shotgun sequence (3179 bp)
Overview 1 RT 1: 148-3176 bp Neighborhood of RT #1 [148, 3179] YhhI RVT-GII GIIM YhhI YhhI NTase_sub_bind Feature: gene Location: 148-351 bp Feature: domain Description: YhhI Location: 151-274 bp Feature: domain Description: YhhI Location: 151-274 bp Feature: gene Location: 428-1678 bp Ori: NCC32013.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 632-1289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 32-1289 bp Feature: domain Description: GIIM Note: maturase Location: 1373-1589 bp Feature: domain Description: GIIM Note: maturase Location: 1373-1589 bp Feature: gene Location: 2233-2889 bp Feature: domain Description: YhhI Location: 2395-2689 bp Feature: domain Description: YhhI Location: 2395-26 89 bp Feature: domain Description: YhhI Location: 2809-2887 bp Feature: domain Description: YhhI Location: 2809-2887 bp Feature: gene Location: 2819-3179 bp Ori: NCC32014.1 Feature: domain Description: NTase_sub_bind Location: 2852-3176 bp Feature: domain Description: NTase_sub_bind Location: 2852-3176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388), NTase_sub_bind (pfam08780)

Seq: RZZQ01002579.1 Chloroflexia bacterium isolate INTA.AUR.084 contig-100_64900, whole genome shotgun sequence (1290 bp)
Overview 1 RT 1: 1-1261 bp Neighborhood of RT #1 [1, 1284] RVT-DGRs UPF0175 Feature: gene Location: 1-984 bp Ori: NCC36177.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 124-769 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 124-7 69 bp Feature: gene Location: 991-1284 bp Ori: NCC36178.1 Feature: domain Description: UPF0175 Location: 1078-1261 bp Feature: domain Description: UPF017 5 Location: 107 8-1261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, UPF0175 (pfam03683)

Seq: RZZQ01001027.1 Chloroflexia bacterium isolate INTA.AUR.084 contig-100_31744, whole genome shotgun sequence (2141 bp)
Overview 1 RT 1: 210-1887 bp Neighborhood of RT #1 [210, 1922] RVT-DGRs DUF4376 Feature: gene Location: 210-1334 bp Ori: NCC33518.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 420-1095 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 420-1095 bp Feature: gene Location: 1344-1922 bp Ori: NCC33519.1 Feature: domain Description: DUF4376 Location: 1611-1887 bp Feature: domain Description: DUF4376 Location: 1611-18 8 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF4376 (pfam14301)

Seq: RZZQ01000103.1 Chloroflexia bacterium isolate INTA.AUR.084 contig-100_9399, whole genome shotgun sequence (4929 bp)
Overview 1 RT 1: 1-1484 bp Neighborhood of RT #1 [1, 1484] RVT-CRISPR-like RNase_HI_like Feature: gene Location: 1-845 bp Ori: NCC31004.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 250-583 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 250-583 bp Feature: gene Location: 853-1299 bp Ori: NCC31005.1 Feature: domain Description: RNase_HI_like Location: 880-1261 bp Feature: domain Description: RNase_HI_like Location: 880-1261 bp Feature: gene Location: 1287-1484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, RNase_HI_like (cd09279)

Seq: RZZQ01001054.1 Chloroflexia bacterium isolate INTA.AUR.084 contig-100_32425, whole genome shotgun sequence (2107 bp)
Overview 1 RT 1: 122-1868 bp Neighborhood of RT #1 [122, 1915] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 122-1915 bp Ori: NCC33580.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-1178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-1178 bp Feature: domain Description: Intron_maturas2 Location: 1283-1544 bp Feature: domain Description: Intron_maturas2 Location: 1283-1544 bp Feature: domain Description: HNHc Note: nucleases Location: 1703-1868 bp Feature: domain Description: HNHc Note: nucleases Location: 1703-1868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: RZZQ01003039.1 Chloroflexia bacterium isolate INTA.AUR.084 contig-100_75161, whole genome shotgun sequence (1159 bp)
Overview 1 RT 1: 632-1157 bp Neighborhood of RT #1 [632, 1159] RVT_N RVT-GII Feature: gene Location: 632-1159 bp Ori: NCC36835.1 Feature: domain Description: RVT_N Location: 656-860 bp Feature: domain Description: RVT_N Location: 656-860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 932-1157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 932-11 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: RZZQ01000597.1 Chloroflexia bacterium isolate INTA.AUR.084 contig-100_22488, whole genome shotgun sequence (2710 bp)
Overview 1 RT 1: 1-2710 bp Neighborhood of RT #1 [1, 2710] Avd_like RVT-DGRs Feature: gene Location: 1-359 bp Ori: NCC32546.1 Feature: domain Description: Avd_like Location: 31-337 bp Feature: domain Description: Avd_like Location: 31-337 bp Feature: gene Location: 356-1519 bp Ori: NCC32547.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 659-1301 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 659-1301 bp Feature: gene Location: 1569-2710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs