myRT

myRT report for GCA_009930015.1_ASM993001v1

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Seq: RZZE01000178.1 Verrucomicrobiae bacterium isolate INTA.AUR.042 contig-100_8641, whole genome shotgun sequence (5221 bp)
Overview 1 RT 1: 81-1723 bp Neighborhood of RT #1 [81, 1723] RVT-GII zinc_ribbon_2 zinc_ribbon_2 TM2 Feature: gene Location: 81-446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381 -444 bp Feature: gene Location: 573-992 bp Ori: NCC61574.1 Feature: domain Description: zinc_ribbon_2 Location: 579-636 bp Feature: domain Description: zinc_ribbon_2 Location: 579-636 bp Feature: domain Description: zinc_ribbon_2 Location: 663-720 bp Feature: domain Description: zinc_ribbon_2 Location: 663-720 bp Feature: domain Description: TM2 Location: 747-882 bp Feature: domain Description: TM2 Location: 747-882 bp Feature: gene Location: 1037-1723 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, zinc_ribbon_2 (pfam13240), TM2 (pfam05154)

Seq: RZZE01000522.1 Verrucomicrobiae bacterium isolate INTA.AUR.042 contig-100_45122, whole genome shotgun sequence (1672 bp)
Overview 1 RT 1: 568-1420 bp Neighborhood of RT #1 [568, 1672] RVT-DGRs Feature: gene Location: 568-1672 bp Ori: NCC62575.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 790-1420 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 790-142 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: RZZE01000297.1 Verrucomicrobiae bacterium isolate INTA.AUR.042 contig-100_18457, whole genome shotgun sequence (3101 bp)
Overview 1 RT 1: 1-2759 bp Neighborhood of RT #1 [1, 2812] alaS RVT-GII GIIM Feature: gene Location: 1-933 bp Ori: NCC62040.1 Gene: alaS Feature: domain Description: alaS Location: 4-922 bp Feature: domain Description: alaS Location: 4-922 bp Feature: gene Location: 1223-1508 bp Feature: gene Location: 1520-2812 bp Ori: NCC62041.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1814-2447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1814-2447 bp Feature: domain Description: GIIM Note: maturase Location: 2528-2759 bp Feature: domain Description: GIIM Note: maturase Location: 2528-2759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT alaS (TIGR00344), RVT-GII, GIIM (pfam08388)

Seq: RZZE01000369.1 Verrucomicrobiae bacterium isolate INTA.AUR.042 contig-100_26927, whole genome shotgun sequence (2397 bp)
Overview 1 RT 1: 284-2193 bp Neighborhood of RT #1 [284, 2193] RVT-GII Feature: gene Location: 284-1678 bp Ori: NCC62230.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 617-1289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 617-1289 bp Feature: gene Location: 1675-2193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RZZE01000585.1 Verrucomicrobiae bacterium isolate INTA.AUR.042 contig-100_51504, whole genome shotgun sequence (1525 bp)
Overview 1 RT 1: 1-1516 bp Neighborhood of RT #1 [1, 1525] RVT-GII GIIM RVT-GII Feature: gene Location: 1-549 bp Ori: NCC62692.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-169 bp Feature: domain Description: GIIM Note: maturase Location: 247-457 bp Feature: domain Description: GIIM Note: maturase Location: 247-45 7 bp Feature: gene Location: 1186-1525 bp Ori: NCC62693.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1441-1516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1441-15 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RZZE01000320.1 Verrucomicrobiae bacterium isolate INTA.AUR.042 contig-100_21914, whole genome shotgun sequence (2755 bp)
Overview 1 RT 1: 738-2394 bp Neighborhood of RT #1 [738, 2755] DUF45 RVT-AbiP2 Feature: gene Location: 738-1463 bp Ori: NCC62110.1 Feature: domain Description: DUF45 Location: 819-1431 bp Feature: domain Description: DUF45 Location: 819-1431 bp Feature: gene Location: 1527-2755 bp Ori: NCC62111.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1944-2394 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1944-2394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), RVT-AbiP2

Seq: RZZE01000125.1 Verrucomicrobiae bacterium isolate INTA.AUR.042 contig-100_5195, whole genome shotgun sequence (7417 bp)
Overview 1 RT 1: 5598-7035 bp Neighborhood of RT #1 [5598, 7034] RVT-GII Feature: gene Location: 5598-5873 bp Feature: gene Location: 6300-6530 bp Feature: gene Location: 6513-7034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6705-7035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67 05-7 035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII