myRT

myRT report for GCA_009930195.1_ASM993019v1

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Seq: RZYT01000252.1 Spirochaetia bacterium isolate INTA.AUR.027 contig-100_17090, whole genome shotgun sequence (3265 bp)
Overview 1 RT 1: 115-2806 bp Neighborhood of RT #1 [115, 3246] Avd_like DUF1566 RVT-DGRs Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 115-456 bp Feature: domain Description: Avd_like Location: 142-448 bp Feature: domain Description: Avd_like Location: 1 42-448 bp Feature: gene Location: 588-758 bp Feature: domain Description: DUF1566 Location: 609-726 bp Feature: domain Description: DUF1 566 Location: 609-726 bp Feature: gene Location: 637-2013 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1003-1702 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 003-1 702 bp Feature: gene Location: 2047-3246 bp Feature: domain Description: Resolvase Location: 2077-2194 bp Feature: domain Description: Resolvase Location: 2077-21 94 bp Feature: domain Description: Recombinase Location: 2263-2584 bp Feature: domain Description: Recombinase Location: 2263-2584 bp Feature: domain Description: Zn_ribbon_recom Location: 2623-2806 bp Feature: domain Description: Zn_ribbon_recom Location: 2623-2806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF1566 (pfam07603), RVT-DGRs

Seq: RZYT01000098.1 Spirochaetia bacterium isolate INTA.AUR.027 contig-100_4602, whole genome shotgun sequence (8052 bp)
Overview 1 RT 1: 4905-7733 bp Neighborhood of RT #1 [4905, 7969] ChtBD3 Avd_like RVT-DGRs Feature: gene Location: 4905-6224 bp Feature: domain Description: ChtBD3 Location: 5754-5877 bp Feature: domain Description: ChtBD3 Location: 5754-5877 bp Feature: gene Location: 6254-6625 bp Feature: domain Description: Avd_like Location: 6302-6605 bp Feature: domain Description: Avd_like Location: 6302 -6605 bp Feature: gene Location: 6848-7969 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7139-7733 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7139-7733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ChtBD3 (smart00495), Avd_like (cd16376), RVT-DGRs

Seq: RZYT01000429.1 Spirochaetia bacterium isolate INTA.AUR.027 contig-100_48474, whole genome shotgun sequence (1591 bp)
Overview 1 RT 1: 531-1566 bp Neighborhood of RT #1 [531, 1591] RVT-GII GIIM Feature: gene Location: 531-1591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-13 80 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1566 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)