myRT

myRT report for GCA_009930425.1_ASM993042v1

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Seq: RZYE01000328.1 Actinobacteria bacterium isolate INTA.AUR.005 contig-100_27442, whole genome shotgun sequence (2368 bp)
Overview 1 RT 1: 1-1514 bp Neighborhood of RT #1 [1, 1678] RVT-GII GIIM Feature: gene Location: 1-245 bp Feature: gene Location: 215-1678 bp Ori: NCD20638.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 557-1241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 557-1 241 bp Feature: domain Description: GIIM Note: maturase Location: 1313-1514 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 3-1 51 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RZYE01000006.1 Actinobacteria bacterium isolate INTA.AUR.005 contig-100_442, whole genome shotgun sequence (32035 bp)
Overview 1 RT 1: 14506-20122 bp Neighborhood of RT #1 [14506, 20122] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III CRISPR_Cas6 Feature: gene Location: 14506-15303 bp Feature: gene Location: 16805-17089 bp Ori: NCD18593.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 16820-17048 bp Feature: domain Description: Cas2 _I_II_III Location: 1682 0-17048 bp Feature: gene Location: 17080-18945 bp Ori: NCD18594.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 17281-17875 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 172 81-17875 bp Feature: domain Description: Cas1_I-II-III Location: 17947-18907 bp Feature: domain Description: Cas1_I-II-III Location: 17947-18907 bp Feature: gene Location: 18970-19716 bp Ori: NCD18595.1 Feature: domain Description: CRISPR_Cas6 Location: 19318-19663 bp Feature: domain Description: CRISPR_Cas6 Location: 19318-19663 bp Feature: gene Location: 19718-20122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), CRISPR_Cas6 (pfam10040)