myRT

myRT report for GCA_009930475.1_ASM993047v1

Download annotations/find similar RTs

Seq: RZYC01000301.1 Spartobacteria bacterium isolate INTA.AUR.003 contig-100_78101, whole genome shotgun sequence (1126 bp)
Overview 1 RT 1: 1-1114 bp Neighborhood of RT #1 [1, 1126] RVT-GII GIIM Feature: gene Location: 1-1126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 253-871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 253-871 bp Feature: domain Description: GIIM Note: maturase Location: 913-1114 bp Feature: domain Description: GIIM Note: maturase Location: 91 3-1 1 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RZYC01000048.1 Spartobacteria bacterium isolate INTA.AUR.003 contig-100_461, whole genome shotgun sequence (31428 bp)
Overview 1 RT 1: 7907-10932 bp Neighborhood of RT #1 [7907, 10932] DUF4160 RVT-DGRs HRDC Feature: gene Location: 7907-8164 bp Feature: domain Description: DUF4160 Location: 7934-8117 bp Feature: domain Description: DUF4160 Location: 7934-8117 bp Feature: gene Location: 8168-8746 bp Feature: gene Location: 8743-10200 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8953-9541 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8953-9541 bp Feature: gene Location: 10197-10700 bp Feature: domain Description: HRDC Location: 10443-10638 bp Feature: domain Description: HRDC Location: 10443-10638 bp Feature: gene Location: 10690-10932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HRDC (smart00341), DUF4160 (pfam13711), RVT-DGRs

Seq: RZYC01000059.1 Spartobacteria bacterium isolate INTA.AUR.003 contig-100_541, whole genome shotgun sequence (29044 bp)
Overview 1 RT 1: 15930-26981 bp Neighborhood of RT #1 [15930, 26986] PRK07006 RecQ UvrD UvrD UvrD RVT-GII GalE PRK09285 Feature: gene Location: 15930-17192 bp Feature: domain Description: PRK07006 Location: 15966-17190 bp Feature: domain Description: PRK07006 Location: 15966-17190 bp Feature: gene Location: 17367-22487 bp Feature: domain Description: RecQ Location: 18147-19260 bp Feature: domain Description: RecQ Location: 18147-19260 bp Feature: domain Description: UvrD Location: 20640-20904 bp Feature: domain Description: UvrD Location: 20640-20904 bp Feature: domain Description: UvrD Location: 21012-21543 bp Feature: domain Description: UvrD Location: 21012-21543 bp Feature: domain Description: UvrD Location: 21837-22113 bp Feature: domain Description: UvrD Location: 2183 7-22113 bp Feature: gene Location: 22652-23977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22910-23600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22910-23 600 bp Feature: gene Location: 24494-25465 bp Feature: domain Description: GalE Location: 24497-25454 bp Feature: domain Description: GalE Location: 24497-25454 bp Feature: gene Location: 25619-26986 bp Feature: domain Description: PRK09285 Location: 25631-26981 bp Feature: domain Description: PRK09285 Location: 2563 1-26981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07006 (isocitrate dehydrogenase; Reviewed), RecQ (COG0514), UvrD (COG0210), RVT-GII, GalE (COG1087), PRK09285 (adenylosuccinate lyase; Provisional)