myRT

myRT report for GCA_009932155.1_ASM993215v1

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Seq: VBVF01000121.1 Mycobacterium tuberculosis strain 30_USFQDG NODE_153_length_307_cov_0.757937, whole genome shotgun sequence (307 bp)
Overview 1 RT 1: 98-287 bp Neighborhood of RT #1 [98, 304] RVT-UG28 Feature: gene Location: 98-304 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 104-287 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 1 04-287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28

Seq: VBVF01000173.1 Mycobacterium tuberculosis strain 30_USFQDG NODE_224_length_215_cov_0.850000, whole genome shotgun sequence (215 bp)
Overview 1 RT 1: 3-195 bp Neighborhood of RT #1 [3, 212] RVT-GII Feature: gene Location: 3-212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VBVF01000005.1 Mycobacterium tuberculosis strain 30_USFQDG NODE_5_length_196035_cov_129.644540, whole genome shotgun sequence (196035 bp)
Overview 1 RT 1: 21167-26205 bp Neighborhood of RT #1 [21167, 26225] LolD CAP_ED LolE SalY RVT-GII PRK13034 Feature: gene Location: 21167-22159 bp Feature: domain Description: LolD Location: 21182-21815 bp Feature: domain Description: LolD Location: 21182-21815 bp Feature: domain Description: CAP_ED Location: 21848-22106 bp Feature: domain Description: CAP_ED Location: 21848-22106 bp Feature: gene Location: 22162-23211 bp Feature: domain Description: LolE Location: 22168-22501 bp Feature: domain Description: LolE Location: 22168-22501 bp Feature: domain Description: SalY Location: 22783-23200 bp Feature: domain Description: SalY Location: 22783 -23 200 bp Feature: gene Location: 23642-24358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23864-24176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 864-24176 bp Feature: gene Location: 24724-24873 bp Feature: gene Location: 24948-26225 bp Feature: domain Description: PRK13034 Location: 24960-26205 bp Feature: domain Description: PRK13 03 4 Location: 24960-26205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolD (COG1136), CAP_ED (cl00047), LolE (COG4591), SalY (COG0577), RVT-GII, PRK13034 (serine hydroxymethyltransferase; Reviewed)