myRT

myRT report for GCA_009933365.1_ASM993336v1

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Seq: NAVS01000024.1 Streptococcus agalactiae strain NNA051 126, whole genome shotgun sequence (223423 bp)
Overview 1 RT 1: 103138-106387 bp Neighborhood of RT #1 [103138, 106387] HTH_XRE RVT-GII GIIM PRK07275 PRK07275 Feature: gene Location: 103138-103497 bp Feature: domain Description: HTH_XRE Location: 103162-103324 bp Feature: domain Description: HTH_XRE Location: 1 031 62-1 03324 bp Feature: gene Location: 103482-103742 bp Feature: gene Location: 103875-105194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104175-104808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 041 75-1 04808 bp Feature: domain Description: GIIM Note: maturase Location: 104877-105099 bp Feature: domain Description: GIIM Note: maturase Location: 1 04877-1 05099 bp Feature: gene Location: 105775-106191 bp Feature: domain Description: PRK07275 Location: 105778-106114 bp Feature: domain Description: PRK07275 Location: 1 05778-1 061 1 4 bp Feature: domain Description: PRK07275 Location: 106141-106189 bp Feature: domain Description: PRK07275 Location: 1 061 41 -1 061 89 bp Feature: gene Location: 106181-106387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), PRK07275 (single-stranded DNA-binding protein; Provisional)

Seq: NAVS01000009.1 Streptococcus agalactiae strain NNA051 111, whole genome shotgun sequence (15117 bp)
Overview 1 RT 1: 516-4145 bp Neighborhood of RT #1 [516, 4145] RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 516-2294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1569 bp Feature: domain Description: Intron_maturas2 Location: 1674-1905 bp Feature: domain Description: Intron_maturas2 Location: 1674-1905 bp Feature: domain Description: HNHc Note: nucleases Location: 2070-2256 bp Feature: domain Description: HNHc Note: nucleases Location: 2 070-2 2 56 bp Feature: gene Location: 2432-3775 bp Feature: domain Description: KOG1000 Location: 2711-3026 bp Feature: domain Description: KOG1000 Location: 2 711-302 6 bp Feature: gene Location: 3846-4145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NAVS01000011.1 Streptococcus agalactiae strain NNA051 113, whole genome shotgun sequence (218496 bp)
Overview 1 RT 1: 110-8428 bp Neighborhood of RT #1 [110, 8428] RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 110-1888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371-1163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 71-1163 bp Feature: domain Description: Intron_maturas2 Location: 1268-1499 bp Feature: domain Description: Intron_maturas2 Location: 1268-1499 bp Feature: domain Description: HNHc Note: nucleases Location: 1664-1850 bp Feature: domain Description: HNHc Note: nucleases Location: 1664-1850 bp Feature: gene Location: 2386-7827 bp Feature: domain Description: N6_Mtase Location: 4378-4969 bp Feature: domain Description: N6_Mtase Location: 43 78-4969 bp Feature: domain Description: COG4646 Location: 5563-7684 bp Feature: domain Description: COG4646 Location: 5563 -7684 bp Feature: gene Location: 7877-8428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: NAVS01000012.1 Streptococcus agalactiae strain NNA051 114, whole genome shotgun sequence (71876 bp)
Overview 1 RT 1: 110-8446 bp Neighborhood of RT #1 [110, 8446] RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 110-1888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371-1163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371-1163 bp Feature: domain Description: Intron_maturas2 Location: 1268-1499 bp Feature: domain Description: Intron_maturas2 Location: 1268-14 99 bp Feature: domain Description: HNHc Note: nucleases Location: 1664-1850 bp Feature: domain Description: HNHc Note: nucleases Location: 1664 -1850 bp Feature: gene Location: 2386-7845 bp Feature: domain Description: N6_Mtase Location: 4390-4984 bp Feature: domain Description: N6_Mtase Location: 4 390-4 984 bp Feature: domain Description: COG4646 Location: 5575-7702 bp Feature: domain Description: COG4 64 6 Location: 5575-7702 bp Feature: gene Location: 7895-8446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: NAVS01000010.1 Streptococcus agalactiae strain NNA051 112, whole genome shotgun sequence (48538 bp)
Overview 1 RT 1: 516-4144 bp Neighborhood of RT #1 [516, 4144] RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 516-2294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-15 69 bp Feature: domain Description: Intron_maturas2 Location: 1674-1905 bp Feature: domain Description: Intron_maturas2 Location: 1674-1905 bp Feature: domain Description: HNHc Note: nucleases Location: 2070-2256 bp Feature: domain Description: HNHc Note: nucleases Location: 2070-225 6 bp Feature: gene Location: 2432-3775 bp Feature: domain Description: KOG1000 Location: 2711-3029 bp Feature: domain Description: KOG1000 Location: 2711-3029 bp Feature: gene Location: 3845-4144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)