myRT

myRT report for GCA_009933705.1_ASM993370v1

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Seq: NAWH01000040.1 Streptococcus agalactiae strain BSE004 297, whole genome shotgun sequence (43587 bp)
Overview 1 RT 1: 41024-43377 bp Neighborhood of RT #1 [41024, 43562] PhoE RVT-GII GIIM Feature: gene Location: 41024-41716 bp Feature: domain Description: PhoE Location: 41033-41693 bp Feature: domain Description: PhoE Location: 41 033-41 693 bp Feature: gene Location: 41839-42273 bp Feature: gene Location: 42534-43562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42540-43104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42540-431 04 bp Feature: domain Description: GIIM Note: maturase Location: 43158-43377 bp Feature: domain Description: GIIM Note: maturase Location: 431 58-43377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhoE (COG0406), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000056.1 Streptococcus agalactiae strain BSE004 315, whole genome shotgun sequence (37849 bp)
Overview 1 RT 1: 736-3720 bp Neighborhood of RT #1 [736, 3720] RVT-GII HNHc Maff2 Feature: gene Location: 736-2595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2323-2485 bp Feature: domain Description: HNHc Note: nucleases Location: 2 32 3-2 485 bp Feature: gene Location: 2700-2846 bp Feature: domain Description: Maff2 Location: 2751-2841 bp Feature: domain Description: Maff2 Location: 2 751-2 841 bp Feature: gene Location: 2857-3720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), RVT-GII, HNHc (smart00507)

Seq: NAWH01000058.1 Streptococcus agalactiae strain BSE004 317, whole genome shotgun sequence (31148 bp)
Overview 1 RT 1: 26184-30938 bp Neighborhood of RT #1 [26184, 31123] PRK05764 PRK07246 RVT-GII GIIM Feature: gene Location: 26184-27377 bp Feature: domain Description: PRK05764 Location: 26190-27363 bp Feature: domain Description: PRK05764 Location: 26190-273 63 bp Feature: gene Location: 27463-29970 bp Feature: domain Description: PRK07246 Location: 27508-29968 bp Feature: domain Description: PRK07246 Location: 27508-29968 bp Feature: gene Location: 30095-31123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30101-30665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 0101-3 0665 bp Feature: domain Description: GIIM Note: maturase Location: 30719-30938 bp Feature: domain Description: GIIM Note: maturase Location: 3 0719-3 093 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05764 (aspartate aminotransferase; Provisional), PRK07246 (bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000057.1 Streptococcus agalactiae strain BSE004 316, whole genome shotgun sequence (25442 bp)
Overview 1 RT 1: 736-3729 bp Neighborhood of RT #1 [736, 3729] RVT-GII HNHc Maff2 Feature: gene Location: 736-2595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054 -1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2323-2485 bp Feature: domain Description: HNHc Note: nucleases Location: 2323-24 85 bp Feature: gene Location: 2700-2846 bp Feature: domain Description: Maff2 Location: 2751-2841 bp Feature: domain Description: Maff2 Location: 2751-284 1 bp Feature: gene Location: 2866-3729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), RVT-GII, HNHc (smart00507)

Seq: NAWH01000032.1 Streptococcus agalactiae strain BSE004 289, whole genome shotgun sequence (43165 bp)
Overview 1 RT 1: 26-3006 bp Neighborhood of RT #1 [26, 3008] RVT-GII GIIM TerB_N TPR rpmG Feature: gene Location: 26-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-5 96 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: domain Description: GIIM Note: maturase Location: 65 0-869 bp Feature: gene Location: 1131-2540 bp Feature: domain Description: TerB_N Location: 1314-1704 bp Feature: domain Description: TerB_N Location: 1314-1704 bp Feature: domain Description: TPR Location: 2265-2451 bp Feature: domain Description: TPR Location: 2265 -245 1 bp Feature: gene Location: 2859-3008 bp Feature: domain Description: rpmG Location: 2862-3006 bp Feature: domain Description: rpmG Location: 2862-3006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TerB_N (pfam13208), TPR (smart00028), RVT-GII, GIIM (pfam08388), rpmG (PRK00595)

Seq: NAWH01000023.1 Streptococcus agalactiae strain BSE004 280, whole genome shotgun sequence (30819 bp)
Overview 1 RT 1: 26-3965 bp Neighborhood of RT #1 [26, 4303] RVT-GII GIIM PepO Abhydrolase_1 Feature: gene Location: 26-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: domain Description: GIIM Note: maturase Location: 6 50-86 9 bp Feature: gene Location: 1291-3237 bp Feature: domain Description: PepO Location: 1330-3235 bp Feature: domain Description: PepO Location: 1330-3235 bp Feature: gene Location: 3269-4303 bp Feature: domain Description: Abhydrolase_1 Location: 3569-3965 bp Feature: domain Description: Abhydrolase_1 Location: 356 9-396 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PepO (COG3590), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000028.1 Streptococcus agalactiae strain BSE004 285, whole genome shotgun sequence (8022 bp)
Overview 1 RT 1: 26-3243 bp Neighborhood of RT #1 [26, 3248] RVT-GII GIIM COG3442 MurE Feature: gene Location: 26-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: gene Location: 1120-1905 bp Feature: domain Description: COG3442 Location: 1168-1894 bp Feature: domain Description: COG3442 Location: 1168-1894 bp Feature: gene Location: 1905-3248 bp Feature: domain Description: MurE Location: 1938-3243 bp Feature: domain Description: MurE Location: 1938-3243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3442 (Glutamine amidotransferase related to the GATase domain of CobQ ), MurE (COG0769), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000054.1 Streptococcus agalactiae strain BSE004 313, whole genome shotgun sequence (16350 bp)
Overview 1 RT 1: 152-3134 bp Neighborhood of RT #1 [152, 3175] RVT-GII HNHc Maff2 SSB_OBF Feature: gene Location: 152-2011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-1208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-1208 bp Feature: domain Description: HNHc Note: nucleases Location: 1739-1901 bp Feature: domain Description: HNHc Note: nucleases Location: 1739-1901 bp Feature: gene Location: 2729-2860 bp Feature: domain Description: Maff2 Location: 2732-2858 bp Feature: domain Description: Maff2 Location: 2732-28 58 bp Feature: gene Location: 2864-3175 bp Feature: domain Description: SSB_OBF Location: 2897-3134 bp Feature: domain Description: SSB_OBF Location: 28 97-3134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Maff2 (pfam12750), SSB_OBF (cd04496)

Seq: NAWH01000024.1 Streptococcus agalactiae strain BSE004 281, whole genome shotgun sequence (10475 bp)
Overview 1 RT 1: 26-2832 bp Neighborhood of RT #1 [26, 2834] RVT-GII GIIM YcgQ YraQ Feature: gene Location: 26-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-59 6 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: gene Location: 1120-1932 bp Feature: domain Description: YcgQ Location: 1123-1930 bp Feature: domain Description: YcgQ Location: 1123-19 30 bp Feature: gene Location: 1932-2834 bp Feature: domain Description: YraQ Location: 1935-2832 bp Feature: domain Description: YraQ Location: 19 35-2832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YcgQ (COG3689), YraQ (COG0701), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000033.1 Streptococcus agalactiae strain BSE004 290, whole genome shotgun sequence (4250 bp)
Overview 1 RT 1: 26-2545 bp Neighborhood of RT #1 [26, 2634] RVT-GII GIIM KhtT Hydrolase_3 Feature: gene Location: 26-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: gene Location: 1224-1865 bp Feature: domain Description: KhtT Location: 1368-1854 bp Feature: domain Description: KhtT Location: 1368-1854 bp Feature: gene Location: 1870-2634 bp Feature: domain Description: Hydrolase_3 Location: 1879-2545 bp Feature: domain Description: Hydrolase_3 Location: 1879-2545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KhtT (COG0490), Hydrolase_3 (pfam08282), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000025.1 Streptococcus agalactiae strain BSE004 282, whole genome shotgun sequence (47344 bp)
Overview 1 RT 1: 26-3378 bp Neighborhood of RT #1 [26, 3392] RVT-GII GIIM NanE UgpB Feature: gene Location: 26-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: gene Location: 1331-2029 bp Feature: domain Description: NanE Location: 1343-2018 bp Feature: domain Description: NanE Location: 1343-2018 bp Feature: gene Location: 2076-3392 bp Feature: domain Description: UgpB Location: 2094-3378 bp Feature: domain Description: UgpB Location: 2094-3378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NanE (pfam04131), UgpB (COG1653), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000050.1 Streptococcus agalactiae strain BSE004 309, whole genome shotgun sequence (16521 bp)
Overview 1 RT 1: 13877-16311 bp Neighborhood of RT #1 [13877, 16496] GlnQ HisM RVT-GII GIIM Feature: gene Location: 13877-14611 bp Feature: domain Description: GlnQ Location: 13892-14606 bp Feature: domain Description: GlnQ Location: 13892-14606 bp Feature: gene Location: 14604-15296 bp Feature: domain Description: HisM Location: 14613-15273 bp Feature: domain Description: HisM Location: 14613-15273 bp Feature: gene Location: 15468-16496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15474-16038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15474-16038 bp Feature: domain Description: GIIM Note: maturase Location: 16092-16311 bp Feature: domain Description: GIIM Note: maturase Location: 16092-16311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnQ (COG1126), HisM (COG0765), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000010.1 Streptococcus agalactiae strain BSE004 267, whole genome shotgun sequence (53582 bp)
Overview 1 RT 1: 51009-53372 bp Neighborhood of RT #1 [51009, 53557] PRK00142 RVT-GII GIIM Feature: gene Location: 51009-51314 bp Feature: gene Location: 51477-52463 bp Feature: domain Description: PRK00142 Location: 51486-52437 bp Feature: domain Description: PRK00142 Location: 51486-52437 bp Feature: gene Location: 52529-53557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52535-53099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52535-53099 bp Feature: domain Description: GIIM Note: maturase Location: 53153-53372 bp Feature: domain Description: GIIM Note: maturase Location: 53153-53372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00142 (rhodanese-related sulfurtransferase), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000026.1 Streptococcus agalactiae strain BSE004 283, whole genome shotgun sequence (15953 bp)
Overview 1 RT 1: 26-3084 bp Neighborhood of RT #1 [26, 3089] RVT-GII GIIM MdlB Feature: gene Location: 26-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: gene Location: 1145-1342 bp Feature: gene Location: 1356-3089 bp Feature: domain Description: MdlB Location: 1392-3084 bp Feature: domain Description: MdlB Location: 1392-3084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MdlB (COG1132), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000030.1 Streptococcus agalactiae strain BSE004 287, whole genome shotgun sequence (6529 bp)
Overview 1 RT 1: 26-3138 bp Neighborhood of RT #1 [26, 3314] RVT-GII GIIM CitB CitA Feature: gene Location: 26-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: gene Location: 1253-1786 bp Feature: domain Description: CitB Location: 1256-1781 bp Feature: domain Description: CitB Location: 1256-1781 bp Feature: gene Location: 1788-3314 bp Feature: domain Description: CitA Location: 1791-3138 bp Feature: domain Description: CitA Location: 1791-3138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CitB (TIGR02484), CitA (COG3290), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000085.1 Streptococcus agalactiae strain BSE004 346, whole genome shotgun sequence (56350 bp)
Overview 1 RT 1: 26-3473 bp Neighborhood of RT #1 [26, 3478] RVT-GII GIIM lipo_e_P4 Pgk Feature: gene Location: 26-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: gene Location: 1278-2147 bp Feature: domain Description: lipo_e_P4 Location: 1281-2142 bp Feature: domain Description: lipo_e_P4 Location: 1281-2142 bp Feature: gene Location: 2282-3478 bp Feature: domain Description: Pgk Location: 2288-3473 bp Feature: domain Description: Pgk Location: 2288-3473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lipo_e_P4 (TIGR01533), Pgk (COG0126), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000027.1 Streptococcus agalactiae strain BSE004 284, whole genome shotgun sequence (7144 bp)
Overview 1 RT 1: 26-1939 bp Neighborhood of RT #1 [26, 1939] RVT-GII GIIM sigpep_I_bact Feature: gene Location: 26-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: gene Location: 1236-1793 bp Feature: domain Description: sigpep_I_bact Location: 1314-1764 bp Feature: domain Description: sigpep_I_bact Location: 1314-17 64 bp Feature: gene Location: 1807-1939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sigpep_I_bact (TIGR02227), RVT-GII, GIIM (pfam08388)

Seq: NAWH01000055.1 Streptococcus agalactiae strain BSE004 314, whole genome shotgun sequence (16670 bp)
Overview 1 RT 1: 152-3105 bp Neighborhood of RT #1 [152, 3173] RVT-GII HNHc Maff2 SSB_OBF Feature: gene Location: 152-2011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-1208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-1208 bp Feature: domain Description: HNHc Note: nucleases Location: 1739-1901 bp Feature: domain Description: HNHc Note: nucleases Location: 1739-1901 bp Feature: gene Location: 2729-2860 bp Feature: domain Description: Maff2 Location: 2732-2858 bp Feature: domain Description: Maff2 Location: 2732-2858 bp Feature: gene Location: 2862-3173 bp Feature: domain Description: SSB_OBF Location: 2886-3105 bp Feature: domain Description: SSB_OBF Location: 2886-3105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Maff2 (pfam12750), SSB_OBF (cd04496)

Seq: NAWH01000029.1 Streptococcus agalactiae strain BSE004 286, whole genome shotgun sequence (15099 bp)
Overview 1 RT 1: 26-1519 bp Neighborhood of RT #1 [26, 1519] RVT-GII GIIM Feature: gene Location: 26-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: gene Location: 1187-1285 bp Feature: gene Location: 1400-1519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NAWH01000031.1 Streptococcus agalactiae strain BSE004 288, whole genome shotgun sequence (38069 bp)
Overview 1 RT 1: 26-1843 bp 2 RT 2: 35748-37859 bp Neighborhood of RT #1 [26, 1843] RVT-GII GIIM Neighborhood of RT #2 [35748, 38044] YabA RsmI RVT-GII GIIM Feature: gene Location: 26-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32-596 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: domain Description: GIIM Note: maturase Location: 650-869 bp Feature: gene Location: 1123-1221 bp Feature: gene Location: 1226-1843 bp Feature: gene Location: 35748-36074 bp Feature: domain Description: YabA Location: 35751-36069 bp Feature: domain Description: YabA Location: 35751-36069 bp Feature: gene Location: 36080-36943 bp Feature: domain Description: RsmI Location: 36119-36938 bp Feature: domain Description: RsmI Location: 36119-36938 bp Feature: gene Location: 37016-38044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37022-37586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37022-37586 bp Feature: domain Description: GIIM Note: maturase Location: 37640-37859 bp Feature: domain Description: GIIM Note: maturase Location: 37640-37859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YabA (COG4467), RsmI (COG0313)