myRT

myRT report for GCA_009933795.1_ASM993379v1

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Seq: NAWL01000005.1 Streptococcus agalactiae strain NND001 126, whole genome shotgun sequence (223424 bp)
Overview 1 RT 1: 103139-106388 bp Neighborhood of RT #1 [103139, 106388] HTH_XRE RVT-GII GIIM PRK07275 PRK07275 Feature: gene Location: 103139-103498 bp Feature: domain Description: HTH_XRE Location: 103163-103325 bp Feature: domain Description: HTH_XRE Location: 1 031 63-1 03325 bp Feature: gene Location: 103483-103743 bp Feature: gene Location: 103876-105195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104176-104809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 041 76-1 04809 bp Feature: domain Description: GIIM Note: maturase Location: 104878-105100 bp Feature: domain Description: GIIM Note: maturase Location: 1 04878-1 051 00 bp Feature: gene Location: 105776-106192 bp Feature: domain Description: PRK07275 Location: 105779-106115 bp Feature: domain Description: PRK07275 Location: 1 05779-1 061 1 5 bp Feature: domain Description: PRK07275 Location: 106142-106190 bp Feature: domain Description: PRK07275 Location: 1 061 42-1 061 90 bp Feature: gene Location: 106182-106388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), PRK07275 (single-stranded DNA-binding protein; Provisional)

Seq: NAWL01000029.1 Streptococcus agalactiae strain NND001 152, whole genome shotgun sequence (231344 bp)
Overview 1 RT 1: 10973-21142 bp Neighborhood of RT #1 [10973, 21142] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 10973-11272 bp Feature: gene Location: 11343-12686 bp Feature: domain Description: KOG1000 Location: 11622-11937 bp Feature: domain Description: KOG1000 Location: 1162 2 -11937 bp Feature: gene Location: 12824-14602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13085-13877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13085-13877 bp Feature: domain Description: Intron_maturas2 Location: 13982-14213 bp Feature: domain Description: Intron_maturas2 Location: 13982 -142 13 bp Feature: domain Description: HNHc Note: nucleases Location: 14378-14564 bp Feature: domain Description: HNHc Note: nucleases Location: 14378-14564 bp Feature: gene Location: 15100-20541 bp Feature: domain Description: N6_Mtase Location: 17092-17683 bp Feature: domain Description: N6_Mtase Location: 17092 -17683 bp Feature: domain Description: COG4646 Location: 18277-20398 bp Feature: domain Description: COG4646 Location: 182 77-2 0398 bp Feature: gene Location: 20591-21142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )