myRT

myRT report for GCA_009934195.1_ASM993419v1

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Seq: NAXH01000009.1 Streptococcus agalactiae strain NNA031 contig13, whole genome shotgun sequence (338714 bp)
Overview 1 RT 1: 57447-67616 bp Neighborhood of RT #1 [57447, 67616] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 57447-57746 bp Feature: gene Location: 57817-59160 bp Feature: domain Description: KOG1000 Location: 58096-58411 bp Feature: domain Description: KOG1 000 Location: 58096-5841 1 bp Feature: gene Location: 59298-61076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59559-60351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59559-60351 bp Feature: domain Description: Intron_maturas2 Location: 60456-60687 bp Feature: domain Description: Intron_maturas2 Location: 60456-60687 bp Feature: domain Description: HNHc Note: nucleases Location: 60852-61038 bp Feature: domain Description: HNHc Note: nucleases Location: 60852-61 038 bp Feature: gene Location: 61574-67015 bp Feature: domain Description: N6_Mtase Location: 63566-64157 bp Feature: domain Description: N6_Mtase Location: 63566-641 57 bp Feature: domain Description: COG4646 Location: 64751-66872 bp Feature: domain Description: COG4646 Location: 64751 -66872 bp Feature: gene Location: 67065-67616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: NAXH01000012.1 Streptococcus agalactiae strain NNA031 contig16, whole genome shotgun sequence (223428 bp)
Overview 1 RT 1: 103137-106386 bp Neighborhood of RT #1 [103137, 106386] HTH_XRE RVT-GII GIIM PRK07275 PRK07275 Feature: gene Location: 103137-103496 bp Feature: domain Description: HTH_XRE Location: 103161-103323 bp Feature: domain Description: HTH_XRE Location: 103161-10332 3 bp Feature: gene Location: 103481-103741 bp Feature: gene Location: 103874-105193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104174-104807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104174-104807 bp Feature: domain Description: GIIM Note: maturase Location: 104876-105098 bp Feature: domain Description: GIIM Note: maturase Location: 104876-105098 bp Feature: gene Location: 105774-106190 bp Feature: domain Description: PRK07275 Location: 105777-106113 bp Feature: domain Description: PRK072 75 Location: 105777-106113 bp Feature: domain Description: PRK07275 Location: 106140-106188 bp Feature: domain Description: PRK072 75 Location: 106140-106188 bp Feature: gene Location: 106180-106386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), PRK07275 (single-stranded DNA-binding protein; Provisional)