myRT

myRT report for GCA_009934235.1_ASM993423v1

Download annotations/find similar RTs

Seq: NAXF01000011.1 Streptococcus agalactiae strain NNA032 contig20, whole genome shotgun sequence (159156 bp)
Overview 1 RT 1: 38865-42114 bp Neighborhood of RT #1 [38865, 42114] HTH_XRE RVT-GII GIIM PRK07275 PRK07275 Feature: gene Location: 38865-39224 bp Feature: domain Description: HTH_XRE Location: 38889-39051 bp Feature: domain Description: HTH_XRE Location: 38889-39051 bp Feature: gene Location: 39209-39469 bp Feature: gene Location: 39602-40921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39902-40535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39902-40535 bp Feature: domain Description: GIIM Note: maturase Location: 40604-40826 bp Feature: domain Description: GIIM Note: maturase Location: 40604-40826 bp Feature: gene Location: 41502-41918 bp Feature: domain Description: PRK07275 Location: 41505-41841 bp Feature: domain Description: PRK07275 Location: 41 505-41 841 bp Feature: domain Description: PRK07275 Location: 41868-41916 bp Feature: domain Description: PRK07275 Location: 41 868-41 91 6 bp Feature: gene Location: 41908-42114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), PRK07275 (single-stranded DNA-binding protein; Provisional)

Seq: NAXF01000021.1 Streptococcus agalactiae strain NNA032 contig30, whole genome shotgun sequence (410494 bp)
Overview 1 RT 1: 129228-139397 bp Neighborhood of RT #1 [129228, 139397] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 129228-129527 bp Feature: gene Location: 129598-130941 bp Feature: domain Description: KOG1000 Location: 129877-130192 bp Feature: domain Description: KOG1000 Location: 12 9877-130192 bp Feature: gene Location: 131079-132857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131340-132132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131340-132 132 bp Feature: domain Description: Intron_maturas2 Location: 132237-132468 bp Feature: domain Description: Intron_maturas2 Location: 132 2 37-132 468 bp Feature: domain Description: HNHc Note: nucleases Location: 132633-132819 bp Feature: domain Description: HNHc Note: nucleases Location: 132 633-132 819 bp Feature: gene Location: 133355-138796 bp Feature: domain Description: N6_Mtase Location: 135347-135938 bp Feature: domain Description: N6_Mtase Location: 135347-135938 bp Feature: domain Description: COG4646 Location: 136532-138653 bp Feature: domain Description: COG4646 Location: 136532 -138653 bp Feature: gene Location: 138846-139397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )