myRT

myRT report for GCA_009934475.1_ASM993447v1

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Seq: NAXR01000018.1 Streptococcus agalactiae strain NNA021 208, whole genome shotgun sequence (251882 bp)
Overview 1 RT 1: 243455-251735 bp Neighborhood of RT #1 [243455, 251773] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 243455-244006 bp Feature: gene Location: 244056-249497 bp Feature: domain Description: N6_Mtase Location: 246048-246639 bp Feature: domain Description: N6_Mtase Location: 246048-246639 bp Feature: domain Description: COG4646 Location: 247233-249354 bp Feature: domain Description: COG4646 Location: 247233-249354 bp Feature: gene Location: 249995-251773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250256-251048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250256-251 048 bp Feature: domain Description: Intron_maturas2 Location: 251153-251384 bp Feature: domain Description: Intron_maturas2 Location: 251 1 53-251 384 bp Feature: domain Description: HNHc Note: nucleases Location: 251549-251735 bp Feature: domain Description: HNHc Note: nucleases Location: 251 549-251 735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NAXR01000015.1 Streptococcus agalactiae strain NNA021 205, whole genome shotgun sequence (48573 bp)
Overview 1 RT 1: 516-4144 bp Neighborhood of RT #1 [516, 4144] RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 516-2294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1569 bp Feature: domain Description: Intron_maturas2 Location: 1674-1905 bp Feature: domain Description: Intron_maturas2 Location: 1674-1905 bp Feature: domain Description: HNHc Note: nucleases Location: 2070-2256 bp Feature: domain Description: HNHc Note: nucleases Location: 2 070-2 2 56 bp Feature: gene Location: 2432-3775 bp Feature: domain Description: KOG1000 Location: 2711-3029 bp Feature: domain Description: KOG1000 Location: 2 711-302 9 bp Feature: gene Location: 3845-4144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NAXR01000002.1 Streptococcus agalactiae strain NNA021 192, whole genome shotgun sequence (71879 bp)
Overview 1 RT 1: 63434-71732 bp Neighborhood of RT #1 [63434, 71770] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 63434-63985 bp Feature: gene Location: 64035-69494 bp Feature: domain Description: N6_Mtase Location: 66039-66633 bp Feature: domain Description: N6_Mtase Location: 6603 9-6663 3 bp Feature: domain Description: COG4646 Location: 67224-69351 bp Feature: domain Description: COG4646 Location: 67224-693 51 bp Feature: gene Location: 69992-71770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70253-71045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70253 -71045 bp Feature: domain Description: Intron_maturas2 Location: 71150-71381 bp Feature: domain Description: Intron_maturas2 Location: 71150-713 81 bp Feature: domain Description: HNHc Note: nucleases Location: 71546-71732 bp Feature: domain Description: HNHc Note: nucleases Location: 71546-7173 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NAXR01000014.1 Streptococcus agalactiae strain NNA021 204, whole genome shotgun sequence (15117 bp)
Overview 1 RT 1: 516-4145 bp Neighborhood of RT #1 [516, 4145] RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 516-2294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777-1569 bp Feature: domain Description: Intron_maturas2 Location: 1674-1905 bp Feature: domain Description: Intron_maturas2 Location: 1674 -1905 bp Feature: domain Description: HNHc Note: nucleases Location: 2070-2256 bp Feature: domain Description: HNHc Note: nucleases Location: 2070-2256 bp Feature: gene Location: 2432-3775 bp Feature: domain Description: KOG1000 Location: 2711-3026 bp Feature: domain Description: KOG1000 Location: 2711-3026 bp Feature: gene Location: 3846-4145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NAXR01000006.1 Streptococcus agalactiae strain NNA021 196, whole genome shotgun sequence (223424 bp)
Overview 1 RT 1: 103139-106388 bp Neighborhood of RT #1 [103139, 106388] HTH_XRE RVT-GII GIIM PRK07275 PRK07275 Feature: gene Location: 103139-103498 bp Feature: domain Description: HTH_XRE Location: 103163-103325 bp Feature: domain Description: HTH_XRE Location: 103163-103325 bp Feature: gene Location: 103483-103743 bp Feature: gene Location: 103876-105195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104176-104809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104176-104809 bp Feature: domain Description: GIIM Note: maturase Location: 104878-105100 bp Feature: domain Description: GIIM Note: maturase Location: 104878-105 100 bp Feature: gene Location: 105776-106192 bp Feature: domain Description: PRK07275 Location: 105779-106115 bp Feature: domain Description: PRK07275 Location: 105 779-106115 bp Feature: domain Description: PRK07275 Location: 106142-106190 bp Feature: domain Description: PRK07275 Location: 106142-106190 bp Feature: gene Location: 106182-106388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), PRK07275 (single-stranded DNA-binding protein; Provisional)