myRT

myRT report for GCA_009934875.1_ASM993487v1

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Seq: NAYN01000005.1 Streptococcus agalactiae strain NNA005 115, whole genome shotgun sequence (230219 bp)
Overview 1 RT 1: 10096-20265 bp Neighborhood of RT #1 [10096, 20265] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 10096-10395 bp Feature: gene Location: 10466-11809 bp Feature: domain Description: KOG1000 Location: 10745-11060 bp Feature: domain Description: KOG1 000 Location: 1 0745-1 1 060 bp Feature: gene Location: 11947-13725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12208-13000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2208-1 3000 bp Feature: domain Description: Intron_maturas2 Location: 13105-13336 bp Feature: domain Description: Intron_maturas2 Location: 1 31 05-1 3336 bp Feature: domain Description: HNHc Note: nucleases Location: 13501-13687 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3501 -1 3687 bp Feature: gene Location: 14223-19664 bp Feature: domain Description: N6_Mtase Location: 16215-16806 bp Feature: domain Description: N6_Mtase Location: 1 621 5-1 6806 bp Feature: domain Description: COG4646 Location: 17400-19521 bp Feature: domain Description: COG4646 Location: 1 7400-1 9521 bp Feature: gene Location: 19714-20265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: NAYN01000012.1 Streptococcus agalactiae strain NNA005 122, whole genome shotgun sequence (223422 bp)
Overview 1 RT 1: 103139-106388 bp Neighborhood of RT #1 [103139, 106388] HTH_XRE RVT-GII GIIM PRK07275 PRK07275 Feature: gene Location: 103139-103498 bp Feature: domain Description: HTH_XRE Location: 103163-103325 bp Feature: domain Description: HTH_XRE Location: 103163-10332 5 bp Feature: gene Location: 103483-103743 bp Feature: gene Location: 103876-105195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104176-104809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104176-104809 bp Feature: domain Description: GIIM Note: maturase Location: 104878-105100 bp Feature: domain Description: GIIM Note: maturase Location: 104878-105100 bp Feature: gene Location: 105776-106192 bp Feature: domain Description: PRK07275 Location: 105779-106115 bp Feature: domain Description: PRK072 75 Location: 105779-106115 bp Feature: domain Description: PRK07275 Location: 106142-106190 bp Feature: domain Description: PRK072 75 Location: 106142 -106190 bp Feature: gene Location: 106182-106388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), PRK07275 (single-stranded DNA-binding protein; Provisional)