myRT

myRT report for GCA_009936075.1_ASM993607v1

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Seq: QWER01000001.1 Anaerotruncus sp. X29 Scaffold1_1, whole genome shotgun sequence (126169 bp)
Overview 1 RT 1: 21183-23771 bp Neighborhood of RT #1 [21183, 23773] Phage_holin_Dp1 SH3_and_anchor RVT-DGRs Phage_XkdX Feature: gene Location: 21183-21389 bp Ori: NCE73405.1 Feature: domain Description: Phage_holin_Dp1 Location: 21192-21378 bp Feature: domain Description: Phage_holin_Dp1 Location: 21 1 92-21 378 bp Feature: gene Location: 21404-21736 bp Ori: NCE73406.1 Feature: domain Description: SH3_and_anchor Location: 21437-21722 bp Feature: domain Description: SH3_and_anchor Location: 21 437-21 722 bp Feature: gene Location: 21743-22939 bp Ori: NCE73407.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21938-22661 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21 938-22661 bp Feature: gene Location: 23142-23633 bp Feature: gene Location: 23633-23773 bp Ori: NCE73409.1 Feature: domain Description: Phage_XkdX Location: 23654-23771 bp Feature: domain Description: Phage_XkdX Location: 23654-23771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_Dp1 (pfam16938), SH3_and_anchor (TIGR04211), RVT-DGRs, Phage_XkdX (pfam09693)

Seq: QWER01000147.1 Anaerotruncus sp. X29 Scaffold140_1, whole genome shotgun sequence (2579 bp)
Overview 1 RT 1: 692-2465 bp Neighborhood of RT #1 [692, 2485] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 692-2485 bp Ori: NCE76818.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 959-1775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 959-1775 bp Feature: domain Description: Intron_maturas2 Location: 1853-2144 bp Feature: domain Description: Intron_maturas2 Location: 1853-2 144 bp Feature: domain Description: HNHc Note: nucleases Location: 2312-2465 bp Feature: domain Description: HNHc Note: nucleases Location: 2 312 -2 465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: QWER01000069.1 Anaerotruncus sp. X29 Scaffold65_1, whole genome shotgun sequence (14644 bp)
Overview 1 RT 1: 10107-14316 bp Neighborhood of RT #1 [10107, 14612] TnaA TnaA RVT-GII GIIM FtsK Feature: gene Location: 10107-11204 bp Feature: domain Description: TnaA Location: 10128-11145 bp Feature: domain Description: TnaA Location: 10128-11145 bp Feature: gene Location: 11356-11931 bp Feature: domain Description: TnaA Location: 11359-11899 bp Feature: domain Description: TnaA Location: 113 59-11899 bp Feature: gene Location: 12350-13036 bp Ori: NCE76363.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12353-12491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123 53 -12491 bp Feature: domain Description: GIIM Note: maturase Location: 12545-12776 bp Feature: domain Description: GIIM Note: maturase Location: 12545-12776 bp Feature: gene Location: 13014-14612 bp Ori: NCE76364.1 Feature: domain Description: FtsK Location: 13452-14316 bp Feature: domain Description: FtsK Location: 13 452-143 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnaA (COG3033), RVT-GII, GIIM (pfam08388), FtsK (COG1674)

Seq: QWER01000290.1 Anaerotruncus sp. X29 Scaffold288_1, whole genome shotgun sequence (1037 bp)
Overview 1 RT 1: 1-970 bp Neighborhood of RT #1 [1, 1037] RVT-GII Feature: gene Location: 1-1037 bp Ori: NCE77080.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139-970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139-970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QWER01000017.1 Anaerotruncus sp. X29 Scaffold15_1, whole genome shotgun sequence (53407 bp)
Overview 1 RT 1: 3512-5951 bp Neighborhood of RT #1 [3512, 5962] Phage_holin_6_1 EnvC RVT-DGRs Avd_like Feature: gene Location: 3512-3826 bp Ori: NCE74957.1 Feature: domain Description: Phage_holin_6_1 Location: 3521-3797 bp Feature: domain Description: Phage_holin_6_1 Location: 35 21-3797 bp Feature: gene Location: 3823-4140 bp Ori: NCE74958.1 Feature: domain Description: EnvC Location: 3913-4111 bp Feature: domain Description: EnvC Location: 3913-4111 bp Feature: gene Location: 4141-5271 bp Ori: NCE74959.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4348-5023 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4348-5 023 bp Feature: gene Location: 5228-5575 bp Feature: gene Location: 5612-5962 bp Ori: NCE74961.1 Gene: avd Feature: domain Description: Avd_like Location: 5639-5951 bp Feature: domain Description: Avd_like Location: 5 639-5 95 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_6_1 (pfam09682), EnvC (COG4942), RVT-DGRs, Avd_like (cd16376)

Seq: QWER01000034.1 Anaerotruncus sp. X29 Scaffold31_1, whole genome shotgun sequence (33920 bp)
Overview 1 RT 1: 26528-32266 bp Neighborhood of RT #1 [26528, 32814] HTH_36 VirD4 RVT-GII DUF3991 Toprim_2 Feature: gene Location: 26528-26782 bp Ori: NCE75650.1 Feature: domain Description: HTH_36 Location: 26561-26720 bp Feature: domain Description: HTH_36 Location: 26 56 1-26 720 bp Feature: gene Location: 26786-28321 bp Ori: NCE75651.1 Feature: domain Description: VirD4 Location: 26792-28040 bp Feature: domain Description: VirD4 Location: 26 792-28040 bp Feature: gene Location: 28417-30333 bp Ori: NCE75652.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28735-29440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28735-29440 bp Feature: gene Location: 31047-31373 bp Feature: gene Location: 31378-32814 bp Ori: NCE75654.1 Feature: domain Description: DUF3991 Location: 31735-31978 bp Feature: domain Description: DUF3991 Location: 31735-31978 bp Feature: domain Description: Toprim_2 Location: 31993-32266 bp Feature: domain Description: Toprim_2 Location: 31993-3226 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), VirD4 (COG3505), RVT-GII, DUF3991 (pfam13154), Toprim_2 (pfam13155)