myRT

myRT report for GCA_009936995.1_ASM993699v1

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Seq: JAACDH010000465.1 Rhodobacterales bacterium isolate HS5BWF_bin.2 HS5bwf_k87_1946886_1_10693, whole genome shotgun sequence (10693 bp)
Overview 1 RT 1: 8041-10683 bp Neighborhood of RT #1 [8041, 10693] HTH_17 RVT-CRISPR-like Feature: gene Location: 8041-8226 bp Ori: NCG20937.1 Feature: domain Description: HTH_17 Location: 8065-8194 bp Feature: domain Description: HTH_1 7 Location: 8065-81 94 bp Feature: gene Location: 8344-9693 bp Feature: gene Location: 9930-10693 bp Ori: NCG20939.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 10068-10683 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 0068-1 0683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-CRISPR

Seq: JAACDH010000145.1 Rhodobacterales bacterium isolate HS5BWF_bin.2 HS5bwf_k87_467518_1_10848, whole genome shotgun sequence (10848 bp)
Overview 1 RT 1: 1022-6853 bp Neighborhood of RT #1 [1022, 6853] RND_mfp TolC RVT-GII Feature: gene Location: 1022-2101 bp Ori: NCG18475.1 Feature: domain Description: RND_mfp Location: 1112-2078 bp Feature: domain Description: RND_mfp Location: 1112 -2 078 bp Feature: gene Location: 2098-4401 bp Ori: NCG18476.1 Feature: domain Description: TolC Location: 3025-4327 bp Feature: domain Description: TolC Location: 302 5-432 7 bp Feature: gene Location: 4964-5056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4973-5057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4973-5057 bp Feature: gene Location: 5174-5731 bp Feature: gene Location: 5861-6853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RND_mfp (TIGR01730), TolC (COG1538), RVT-GII

Seq: JAACDH010000157.1 Rhodobacterales bacterium isolate HS5BWF_bin.2 HS5bwf_k87_496069_1_2870, whole genome shotgun sequence (2870 bp)
Overview 1 RT 1: 480-2701 bp Neighborhood of RT #1 [480, 2701] RVT-GII Feature: gene Location: 480-1799 bp Ori: NCG18570.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1443 bp Feature: gene Location: 2558-2701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAACDH010000695.1 Rhodobacterales bacterium isolate HS5BWF_bin.2 HS5bwf_k87_4435024_1_2980, whole genome shotgun sequence (2980 bp)
Overview 1 RT 1: 1-2455 bp Neighborhood of RT #1 [1, 2481] RVT-DGRs Avd_like HRDC Feature: gene Location: 1-649 bp Feature: gene Location: 748-1770 bp Ori: NCG22385.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 991-1573 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 991-1573 bp Feature: gene Location: 1752-2087 bp Ori: NCG22386.1 Gene: avd Feature: domain Description: Avd_like Location: 1779-2082 bp Feature: domain Description: Avd_like Location: 1779-2082 bp Feature: gene Location: 2077-2481 bp Ori: NCG22387.1 Feature: domain Description: HRDC Location: 2260-2455 bp Feature: domain Description: HRDC Location: 2260-24 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), HRDC (smart00341)